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肽核酸解旋剂在基于荧光的细菌DNA检测中的应用。

Application of PNA openers for fluorescence-based detection of bacterial DNA.

作者信息

Smolina Irina

机构信息

Department of Biomedical Engineering, Boston University, Boston, MA, USA.

出版信息

Methods Mol Biol. 2013;1039:223-31. doi: 10.1007/978-1-62703-535-4_18.

DOI:10.1007/978-1-62703-535-4_18
PMID:24026699
Abstract

Peptide nucleic acid (PNA) openers have the unique ability to invade double-stranded DNA with high efficiency and sequence specificity, making it possible to detect short (about 20 bp), single-copy bacterial DNA sequences. PNA openers bind to a target signature site on one strand of bacterial DNA, leaving the other strand open for hybridization with a circularizable oligonucleotide probe. The assembled complex serves as a template for rolling circle amplification. The obtained amplicon is decorated with short, single-stranded DNA probes carrying fluorophores and detected via fluorescence microscopy.

摘要

肽核酸(PNA)开启子具有独特能力,能够高效且序列特异性地侵入双链DNA,从而有可能检测短的(约20个碱基对)单拷贝细菌DNA序列。PNA开启子与细菌DNA一条链上的目标特征位点结合,使另一条链保持开放以便与可环化的寡核苷酸探针杂交。组装好的复合物作为滚环扩增的模板。所获得的扩增子用携带荧光团的短单链DNA探针进行标记,并通过荧光显微镜检测。

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