Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Ljubljana, Aškerčeva 7, 1000 , Ljubljana, Slovenia.
Mol Divers. 2013 Nov;17(4):773-80. doi: 10.1007/s11030-013-9474-6. Epub 2013 Sep 6.
We report a small, focused library of 30 diverse 2-amino-5-alkylidene-thiazol-4-ones that was assayed in a whole-cell antibacterial screen against a panel of several bacterial strains and a yeast. Most of the compounds exhibited modest to significant antibacterial activity against Pseudomonas aeruginosa, Bacillus subtilis and Staphylococcus aureus, and no activity against Salmonella typhimurium and Escherichia coli. The antibacterial activity depends markedly upon substituents on the thiazol-4-one core, and the most potent compound assayed ([Formula: see text]-4-((2-(4-methylpiperidin-1-yl)-4-oxothiazol-5(4H)-ylidene)methyl)benzonitrile) reached a minimal inhibitory concentration (MIC) value of [Formula: see text] on P. aeruginosa strain. An important feature of the tested compounds is their low influence on cell viability, as determined in a HEK-293 metabolic activity assay. In light of the encouraging in vitro antimicrobial assay results against several bacterial strains, we have generated a pharmacophore model using the Discovery studio 3.0 package (Accelrys Inc., San Diego, USA), which exposed the spatial arrangement of key molecular properties responsible for our observed MIC results. Considering the absence of a defined target and the limitation of the described approach to pool different scaffolds, the calculated pharmacophore model could be used for library enrichment to identify compounds with a thiazolidinone scaffold with improved antimicrobial potency and physico-chemical properties.
我们报告了一个由 30 种不同的 2-氨基-5-亚烷基噻唑-4-酮组成的小而集中的文库,该文库在针对几种细菌菌株和酵母的全细胞抗菌筛选中进行了检测。大多数化合物对铜绿假单胞菌、枯草芽孢杆菌和金黄色葡萄球菌表现出适度至显著的抗菌活性,对鼠伤寒沙门氏菌和大肠杆菌没有活性。抗菌活性明显取决于噻唑-4-酮核心上的取代基,所测定的最有效化合物([Formula: see text]-4-((2-(4-甲基哌啶-1-基)-4-氧代噻唑-5(4H)-基)亚甲基)苯甲腈)对铜绿假单胞菌菌株的最小抑菌浓度(MIC)值达到[Formula: see text]。测试化合物的一个重要特征是它们对细胞活力的影响很小,这是在 HEK-293 代谢活性测定中确定的。鉴于对几种细菌菌株的体外抗菌测定结果令人鼓舞,我们使用 Discovery studio 3.0 软件包(美国圣地亚哥的 Accelrys Inc.)生成了一个药效团模型,该模型揭示了负责我们观察到的 MIC 结果的关键分子性质的空间排列。考虑到没有明确的靶标和所描述方法对不同支架进行分组的限制,计算出的药效团模型可用于文库富集,以鉴定具有噻唑烷酮支架的化合物,这些化合物具有改善的抗菌效力和物理化学性质。