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细菌 FAD 组装因子 SdhE 的保守 RGxxE 基序对于琥珀酸脱氢酶黄素化和活性是必需的。

The conserved RGxxE motif of the bacterial FAD assembly factor SdhE is required for succinate dehydrogenase flavinylation and activity.

机构信息

Department of Microbiology and Immunology, University of Otago , P.O. Box 56, Dunedin 9054, New Zealand.

出版信息

Biochemistry. 2013 Oct 29;52(43):7628-40. doi: 10.1021/bi401006a. Epub 2013 Oct 18.

DOI:10.1021/bi401006a
PMID:24070374
Abstract

Succinate dehydrogenase (SDH) is an important respiratory enzyme that plays a critical role in the generation of energy in the majority of eukaryotes, bacteria, and archaea. The activity of SDH is dependent on the covalent attachment of the redox cofactor FAD to the flavoprotein subunit SdhA. In the Gram-negative bacteria Escherichia coli and Serratia sp. ATCC 39006, the covalent attachment of FAD to SdhA is dependent on the FAD assembly factor SdhE (YgfY). Although mechanisms have been proposed, experimental evidence that elucidates the molecular details of SdhE-mediated flavinylation are scarce. In this study, truncation and alanine swap mutagenesis of SdhE identified a highly conserved RGxxE motif that was important for SdhE function. Interestingly, RGxxE site-directed variants were not impaired in terms of protein folding or interactions with SdhA. Purification and analysis of SdhA from different mutant backgrounds demonstrated that SdhE interacts with and flavinylates folded SdhA without a requirement for the assembly of the entire SDH complex. SdhA was also partially active in the absence of SdhE, suggesting that SdhA is able to attach FAD through an inefficient autocatalytic mechanism. The results presented are of widespread relevance because SdhE and SDH are required for bacterial pathogenesis and mutations in the eukaryotic homologues of SdhE and SDH are associated with cancer in humans.

摘要

琥珀酸脱氢酶(SDH)是一种重要的呼吸酶,在大多数真核生物、细菌和古菌中都起着关键作用,负责产生能量。SDH 的活性依赖于氧化还原辅因子 FAD 与黄素蛋白亚基 SdhA 的共价结合。在革兰氏阴性细菌大肠杆菌和沙雷氏菌 ATCC 39006 中,FAD 与 SdhA 的共价结合依赖于 FAD 组装因子 SdhE(YgfY)。虽然已经提出了一些机制,但缺乏阐明 SdhE 介导的黄素化的分子细节的实验证据。在这项研究中,对 SdhE 的截断和丙氨酸替换突变分析确定了一个高度保守的 RGxxE 基序,该基序对 SdhE 的功能很重要。有趣的是,RGxxE 定点突变体在蛋白质折叠或与 SdhA 的相互作用方面没有受损。来自不同突变背景的 SdhA 的纯化和分析表明,SdhE 与折叠的 SdhA 相互作用并进行黄素化,而不需要整个 SDH 复合物的组装。在没有 SdhE 的情况下,SdhA 也具有部分活性,这表明 SdhA 能够通过低效的自动催化机制附着 FAD。所提出的结果具有广泛的相关性,因为 SdhE 和 SDH 是细菌发病机制所必需的,并且 SdhE 和 SDH 的真核同源物的突变与人类癌症有关。

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