Clinical Neurosciences Research Group, Clinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, United Kingdom.
Genomic Informatics, Human Genetics & Genomic Medicine, Faculty of Medicine, University of Southampton, Southampton, United Kingdom.
Ophthalmology. 2013 Dec;120(12):2637-2643. doi: 10.1016/j.ophtha.2013.07.046. Epub 2013 Sep 23.
To determine if prespecified genetic polymorphisms influence responsiveness to vascular endothelial growth factor (VEGF) inhibition in neovascular age-related macular degeneration (nAMD). The objectives were to replicate 3 reported pharmacogenetic associations of response in nAMD and to test for novel associations.
Cohort study, combining information about patients' genotypes with information from a randomized controlled trial about responsiveness to anti-VEGF therapy for nAMD.
Five hundred nine participants with nAMD, enrolled in the Alternative Treatments to Inhibit VEGF in Patients with Age-Related Choroidal Neovascularisation (IVAN) trial.
Participants were classified as responders or nonresponders to VEGF inhibition based on the optical coherence tomography (OCT) metric of total retinal thickness (TRT). We computed the change in TRT from baseline to the latest time point for which OCT data were available (3, 6, 9, or 12 months). Eyes with changes in TRT greater than or equal to the 75th percentile or more were classified as responders, and those with changes less than or equal to the 25th percentile or lower were classified as non-responders. Three previously reported associations of response to VEGF inhibition in nAMD involving single nucleotide polymorphisms (SNPs) at the CFH, FZD4, and HTRA1/ARMS2 loci were tested for replication. An additional 482 SNPs also were tested using a candidate gene approach. Associations were estimated as odds ratios (ORs) with confidence intervals (CIs).
The primary outcome was evidence of a genetic association with response to VEGF inhibition as measured by change in TRT.
One hundred twenty-six participants were classified as responders and 128 were classified as nonresponders. The SNP rs10490924 in HTRA1/ARMS2 showed a borderline association with responsiveness after Bonferroni correction (OR, 1.53; CI, 0.99-2.36; P = 0.055, Bonferroni correction). None of the other 484 additional SNPs tested for association was significant after Bonferroni correction for multiple testing. The smallest corrected P value was 0.84 (P = 0.002, uncorrected) for rs9679290 in the EPAS1 (HIF2A) gene on chromosome 2. Four of the 10 most significant results were in this gene.
We estimated pharmacogenetic associations using high-quality phenotype data from a randomized controlled clinical trial of nAMD. No significant association or replication of previous associations were observed. Further investigation of the EPAS1 (HIF2A) gene, however, may, be merited.
确定预先指定的遗传多态性是否会影响新生血管性年龄相关性黄斑变性(nAMD)对血管内皮生长因子(VEGF)抑制的反应。目的是复制 nAMD 反应的 3 项已报道的药物遗传学关联,并测试新的关联。
队列研究,将患者的基因型信息与抗 VEGF 治疗 nAMD 的随机对照试验的信息相结合。
509 名患有 nAMD 的参与者,参加了替代治疗抑制年龄相关性脉络膜新生血管化患者的血管内皮生长因子(IVAN)试验。
根据光学相干断层扫描(OCT)总视网膜厚度(TRT)指标,将参与者分为 VEGF 抑制反应者或非反应者。我们计算了从基线到可获得 OCT 数据的最新时间点(3、6、9 或 12 个月)的 TRT 变化。TRT 变化大于或等于第 75 百分位或更高的眼被归类为反应者,而 TRT 变化小于或等于第 25 百分位或更低的眼被归类为非反应者。测试了先前报道的与 nAMD 中 VEGF 抑制反应相关的 3 个单核苷酸多态性(SNP)与 CFH、FZD4 和 HTRA1/ARMS2 基因座的关联,以验证其复制性。还使用候选基因方法测试了另外 482 个 SNP。关联估计为比值比(OR)和置信区间(CI)。
主要结局是遗传与 VEGF 抑制反应的关联证据,以 TRT 变化衡量。
126 名参与者被归类为反应者,128 名参与者被归类为非反应者。HTRA1/ARMS2 中的 SNP rs10490924 在 Bonferroni 校正后与反应性呈边缘关联(OR,1.53;CI,0.99-2.36;P=0.055,Bonferroni 校正)。在进行多次检验的 Bonferroni 校正后,未发现其他 484 个测试的 SNP 存在关联。校正后最小的 P 值为 0.84(P=0.002,未校正),位于染色体 2 上的 EPAS1(HIF2A)基因中的 rs9679290。10 个最显著结果中有 4 个位于该基因中。
我们使用 nAMD 的随机对照临床试验的高质量表型数据估计了药物遗传学关联。未观察到显著的关联或先前关联的复制。然而,进一步研究 EPAS1(HIF2A)基因可能是值得的。