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制备适用于评估基于核酸扩增技术的替代支原体检测方法的参考储备液。

Preparation of reference stocks suitable for evaluation of alternative NAT-based mycoplasma detection methods.

作者信息

Dabrazhynetskaya A, Furtak V, Volokhov D, Beck B, Chizhikov V

机构信息

Center for Biologics Evaluation and Research, Food and Drug Administration, Rockville, MD, USA.

出版信息

J Appl Microbiol. 2014 Jan;116(1):100-8. doi: 10.1111/jam.12352. Epub 2013 Oct 24.

Abstract

AIMS

The aim of this study was to optimize conditions for preparation and cryopreservation of mycoplasma reference materials suitable to evaluate alternative nucleic acid testing (NAT)-based assays and to compare their limits of detection (LODs) with those of conventional culture-based methods.

METHODS AND RESULTS

Acholeplasma laidlawii, Mycoplasma gallisepticum and Mycoplasma arginini stocks with low ratios of genomic copies to colony forming units (12, 8 and 4, respectively) harvested in early stationary phases of growth were preserved with different cryoprotective agents (CPAs) under slow (1°C min(-1)), moderate (8°C min(-1)), fast (13°C min(-1)) and 'snapshot' (60°C min(-1)) cooling rates. Depending on mycoplasma species, increasing the cooling rate from slow to snapshot enhanced cell survival up to 5-fold. The addition of 10% (v/v) dimethyl sulfoxide (DMSO) and 15% (v/v) glycerol significantly improved cell survival of all tested strains. Cryoprotected stocks maintained high and stable titres for at least 1 year during storage at -80°C. Sonication of cell cultures prior to cryopreservation enhanced cell dispersion and reduced of GC/CFU ratios.

CONCLUSIONS

It is feasible to prepare stable reference stocks of cryopreserved mycoplasma cells suitable to reliably compare NAT- and culture-based mycoplasma testing methods.

SIGNIFICANCE AND IMPACT OF THE STUDY

This study describes experimental results demonstrating the preparation and storage of highly viable and dispersed mycoplasma reference stocks suitable for comparing alternative NAT-and conventional culture-based mycoplasma detection methods.

摘要

目的

本研究的目的是优化适合评估基于替代核酸检测(NAT)的检测方法的支原体参考物质的制备和冷冻保存条件,并将其检测限(LOD)与传统基于培养的方法进行比较。

方法与结果

在生长早期稳定期收获的基因组拷贝与菌落形成单位比例较低(分别为12、8和4)的莱氏无胆甾原体、鸡毒支原体和精氨酸支原体菌株,在不同的冷冻保护剂(CPA)下,以缓慢(1°C/分钟)、适度(8°C/分钟)、快速(13°C/分钟)和“快照”(60°C/分钟)的冷却速率进行保存。根据支原体种类的不同,将冷却速率从缓慢提高到“快照”可使细胞存活率提高5倍。添加10%(v/v)二甲基亚砜(DMSO)和15%(v/v)甘油可显著提高所有测试菌株的细胞存活率。冷冻保护后的菌株在-80°C储存期间至少1年内保持高且稳定的滴度。冷冻保存前对细胞培养物进行超声处理可增强细胞分散并降低GC/CFU比例。

结论

制备稳定的冷冻保存支原体细胞参考菌株以可靠比较基于NAT和培养的支原体检测方法是可行的。

研究的意义和影响

本研究描述了实验结果,证明了制备和储存高度存活且分散的支原体参考菌株适用于比较替代NAT和传统基于培养的支原体检测方法。

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