Department of Electrical Communication Engineering, Indian Institute of Science, Bangalore, Karnataka, India.
PLoS One. 2013 Oct 8;8(10):e74910. doi: 10.1371/journal.pone.0074910. eCollection 2013.
Synfire waves are propagating spike packets in synfire chains, which are feedforward chains embedded in random networks. Although synfire waves have proved to be effective quantification for network activity with clear relations to network structure, their utilities are largely limited to feedforward networks with low background activity. To overcome these shortcomings, we describe a novel generalisation of synfire waves, and define 'synconset wave' as a cascade of first spikes within a synchronisation event. Synconset waves would occur in 'synconset chains', which are feedforward chains embedded in possibly heavily recurrent networks with heavy background activity. We probed the utility of synconset waves using simulation of single compartment neuron network models with biophysically realistic conductances, and demonstrated that the spread of synconset waves directly follows from the network connectivity matrix and is modulated by top-down inputs and the resultant oscillations. Such synconset profiles lend intuitive insights into network organisation in terms of connection probabilities between various network regions rather than an adjacency matrix. To test this intuition, we develop a Bayesian likelihood function that quantifies the probability that an observed synfire wave was caused by a given network. Further, we demonstrate it's utility in the inverse problem of identifying the network that caused a given synfire wave. This method was effective even in highly subsampled networks where only a small subset of neurons were accessible, thus showing it's utility in experimental estimation of connectomes in real neuronal-networks. Together, we propose synconset chains/waves as an effective framework for understanding the impact of network structure on function, and as a step towards developing physiology-driven network identification methods. Finally, as synconset chains extend the utilities of synfire chains to arbitrary networks, we suggest utilities of our framework to several aspects of network physiology including cell assemblies, population codes, and oscillatory synchrony.
同步波是同步链中的传播尖峰包,同步链是嵌入随机网络中的前馈链。虽然同步波已被证明是一种有效的网络活动量化方法,与网络结构有明确的关系,但它们的用途在很大程度上仅限于背景活动较低的前馈网络。为了克服这些缺点,我们描述了一种新的同步波推广,将“同步集波”定义为同步事件中第一个尖峰的级联。同步集波将出现在“同步集链”中,同步集链是嵌入可能具有大量背景活动的重循环网络中的前馈链。我们使用具有生物物理现实电导的单室神经元网络模型的模拟来探测同步集波的效用,并证明同步集波的传播直接来自于网络连接矩阵,并受到自上而下的输入和由此产生的振荡的调制。这种同步集波模式以不同网络区域之间的连接概率为基础,而不是邻接矩阵,为网络组织提供了直观的见解。为了检验这种直觉,我们开发了一种贝叶斯似然函数,用于量化观察到的同步波是由给定网络引起的概率。此外,我们还展示了它在识别引起给定同步波的网络的反问题中的效用。即使在只有一小部分神经元可访问的高度抽样网络中,这种方法也是有效的,因此它在实验估计真实神经元网络中的连接组方面具有实用价值。总的来说,我们提出同步集链/波作为理解网络结构对功能影响的有效框架,并作为开发基于生理学的网络识别方法的一个步骤。最后,由于同步集链将同步链的用途扩展到任意网络,我们建议我们的框架在网络生理学的几个方面具有用途,包括细胞集合、群体编码和振荡同步。