• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

选择鉴定具有优良等位基因的种质资源的方法:1. 理论结果。

Choice of method for identifying germplasm with superior alleles : 1. Theoretical results.

机构信息

Seneca Associates, 84 Hammond Street, 02138, Cambridge, MA, USA.

出版信息

Theor Appl Genet. 1988 Aug;76(2):209-16. doi: 10.1007/BF00257848.

DOI:10.1007/BF00257848
PMID:24232108
Abstract

Elite, adapted germplasm is not likely to contain all the favorable alleles available in a species. Three statistics were evaluated for screening populations for their ability to contribute favorable dominant alleles not available in an elite single cross: (1) a statistic proposed by Dudley (SD)=[(P x I1-I1)(I1 x I2-I2)-(P x I2-I2) (I1 x I2-I1)]/[2(I1-I2)]; (2) the upper bound minimum (P x I1-I1, P x I2-I2) ; and (3) the testcross to the single cross [TC(SC)]=P x (I1 x I2), where P is the population to be evaluated and I1 and I2 are homozygous parents of the elite single cross I1×I2. A superiority measure for a population was defined as the product of frequencies of favorable alleles and effects summed over loci where I1×I2 is homozygous unfavorable. Of the statistics considered, TC (SC) should have the highest genetic correlation with the superiority measure under the assumptions made, require the fewest testing resources and have the smallest standard error. Methods considered for screening inbreds were: (1) SDI proposed by Dudley=[(I1 x IW)+(I2 x IW)-I1-I2-IW-(I1 x I2)]/4 ; (2) TC(SC)=IW x (I1 xI2); and (3) UBND=minimum where Iw is the inbred to be evaluated. The superiority measure of an inbred Iw was defined as the relative number of loci where I1 and I2 are unfavorable and Iw is favorable. The genetic correlation with the superiority measure should be highest for SDI. The larger number of measurements used in calculation, the necessity of evaluating potentially unadapted inbreds and larger testing resources required for SDI suggest further research should be done to evaluate these statistics.

摘要

优良、适应的种质资源不太可能包含一个物种中所有有利的等位基因。为了筛选具有提供优良显性等位基因能力的群体,这些等位基因在优良单交中不存在,评估了三个统计数据:(1) Dudley 提出的统计量(SD)=[(P x I1-I1)(I1 x I2-I2)-(P x I2-I2) (I1 x I2-I1)]/[2(I1-I2)]; (2) 上限最小值(P x I1-I1, P x I2-I2) ; (3) 与单交的测验交[TC(SC)]=P x (I1 x I2),其中 P 是要评估的群体,I1 和 I2 是优良单交 I1×I2 的纯合亲本。群体的优势度量定义为在 I1×I2 为纯合不利的位点上有利等位基因频率和效应的乘积。在所做的假设下,考虑的统计数据中,TC (SC) 应该与优势度量具有最高的遗传相关性,需要最少的测试资源和最小的标准误差。考虑用于筛选自交系的方法有:(1) Dudley 提出的 SDI=[(I1 x IW)+(I2 x IW)-I1-I2-IW-(I1 x I2)]/4; (2) TC(SC)=IW x (I1 xI2); 和 (3) UBND=最小值,其中 Iw 是要评估的自交系。自交系 Iw 的优势度量定义为 I1 和 I2 不利而 Iw 有利的位点的相对数量。SDI 与优势度量的遗传相关性应该最高。计算中使用的测量值越多,评估潜在不适应的自交系的必要性以及 SDI 所需的测试资源越大,这表明应该进一步研究这些统计数据。

相似文献

1
Choice of method for identifying germplasm with superior alleles : 1. Theoretical results.选择鉴定具有优良等位基因的种质资源的方法:1. 理论结果。
Theor Appl Genet. 1988 Aug;76(2):209-16. doi: 10.1007/BF00257848.
2
Choice of method for identifying germplasm with superior alleles : 2. Computer simulation results.选择鉴定具有优良等位基因的种质资源的方法:2. 计算机模拟结果。
Theor Appl Genet. 1988 Aug;76(2):217-27. doi: 10.1007/BF00257849.
3
Methods to evaluate populations for alleles to improve an elite hybrid.评估群体中等位基因以改良优良杂交种的方法。
Theor Appl Genet. 1994 Aug;88(6-7):653-61. doi: 10.1007/BF01253967.
4
Evaluation of three test statistics used to identify maize inbred lines with new favorable alleles not present in elite single cross.评价三种用于鉴定新的有利等位基因在优良单交中不存在的玉米自交系的测验统计量。
Theor Appl Genet. 1989 Mar;77(3):402-8. doi: 10.1007/BF00305836.
5
An alternative statistic for identifying lines useful for improving parents of an elite single cross.一种用于识别改良优良单交亲本有用系的替代统计方法。
Theor Appl Genet. 1990 Jul;80(1):105-9. doi: 10.1007/BF00224022.
6
DNA footprints of the two kinetically significant intermediates in formation of an RNA polymerase-promoter open complex: evidence that interactions with start site and downstream DNA induce sequential conformational changes in polymerase and DNA.RNA聚合酶-启动子开放复合物形成过程中两个动力学上重要中间体的DNA足迹:与起始位点和下游DNA的相互作用诱导聚合酶和DNA顺序构象变化的证据。
J Mol Biol. 1998 Nov 6;283(4):741-56. doi: 10.1006/jmbi.1998.2129.
7
Apparent radii of the native, stable intermediates and unfolded conformers of the alpha-subunit of tryptophan synthase from E. coli, a TIM barrel protein.来自大肠杆菌的色氨酸合酶α亚基(一种TIM桶状蛋白)的天然态、稳定中间体和未折叠构象的表观半径。
Biochemistry. 1999 Oct 5;38(40):13367-78. doi: 10.1021/bi991296s.
8
Effect of salt and pH on the activation of photoactive yellow protein and gateway mutants Y98Q and Y98F.盐和pH值对光活性黄色蛋白及门控突变体Y98Q和Y98F激活的影响。
Biochemistry. 2005 Oct 25;44(42):13650-63. doi: 10.1021/bi050991z.
9
Photocycle and photoreversal of photoactive yellow protein at alkaline pH: kinetics, intermediates, and equilibria.碱性pH条件下光活性黄色蛋白的光循环与光逆转:动力学、中间体及平衡
Biochemistry. 2006 Jun 13;45(23):7057-68. doi: 10.1021/bi0517335.
10
The relative protein abundance of UGT1A alternative splice variants as a key determinant of glucuronidation activity in vitro.UGT1A 可变剪接异构体的相对蛋白丰度是体外葡萄糖醛酸化活性的关键决定因素。
Drug Metab Dispos. 2013 Apr;41(4):694-7. doi: 10.1124/dmd.112.050468. Epub 2013 Jan 29.

引用本文的文献

1
Choice of method for identifying germplasm with superior alleles : 2. Computer simulation results.选择鉴定具有优良等位基因的种质资源的方法:2. 计算机模拟结果。
Theor Appl Genet. 1988 Aug;76(2):217-27. doi: 10.1007/BF00257849.
2
Allozyme marker loci associated with favorable alleles for grain yield in maize.与玉米产量有利等位基因相关的同工酶标记基因座。
Theor Appl Genet. 1990 Oct;80(4):518-22. doi: 10.1007/BF00226754.
3
Identifying populations useful for improving parents of a single cross based on net transfer of alleles.基于等位基因净转移鉴定有利于改进单交亲本的群体。

本文引用的文献

1
The components of genetic variance in populations of biparental progenies and their use in estimating the average degree of dominance.双亲后代群体中遗传方差的组成部分及其在估计平均显性程度中的应用。
Biometrics. 1948 Dec;4(4):254-66.
2
Crop germplasm conservation and developing countries.作物种质资源保护与发展中国家。
Science. 1983 Apr 8;220(4593):163-9. doi: 10.1126/science.220.4593.163.
Theor Appl Genet. 1990 Sep;80(3):349-52. doi: 10.1007/BF00210071.
4
An alternative statistic for identifying lines useful for improving parents of an elite single cross.一种用于识别改良优良单交亲本有用系的替代统计方法。
Theor Appl Genet. 1990 Jul;80(1):105-9. doi: 10.1007/BF00224022.
5
Methods to evaluate populations for alleles to improve an elite hybrid.评估群体中等位基因以改良优良杂交种的方法。
Theor Appl Genet. 1994 Aug;88(6-7):653-61. doi: 10.1007/BF01253967.
6
A testcross procedure for selecting exotic strains to improve pure-line cultivars in predominantly self-fertilizing species.选择外来品系以改良主要自花授粉物种纯系品种的测交程序。
Theor Appl Genet. 1996 Jan;92(1):78-82. doi: 10.1007/BF00222954.