Guo Zheng, Wang Fengbin, Shen Tiantian, Huang Jing, Wang Yuandong, Ji Chaoneng
Room 109, Second Biology Building, Fudan University, 220 Handan Road, 200433, Shanghai, China.
Protein Pept Lett. 2014 May;21(5):483-9. doi: 10.2174/0929866520666131119200255.
Thermostable p-nitrophenylphosphatase from Bacillus Stearothermophilus (Bs-TpNPPase) is involved in the Mg(2+)-dependent hydrolysis of the phosphoenzyme at an optimum reaction temperature of 55°C. Bs-TpNPPase has been cloned and overexpressed in the E.coli M15 strain. Based on the conserved active sites, the protein was suggested to be a member of the haloalkanoate dehalogenase (HAD) superfamily. Two site-specific point mutants of Bs-TpNPPase were prepared by changing the catalytic Asp10 and Thr43 to Ala10 and Ala43, respectively. The activity of the two mutants further confirms Bs-TpNPPase as a member of the HAD superfamily. HAD superfamily can be divided into the four subfamilies and play several biochemical roles such as DNA repair, signal transduction and secondary metabolism. To understand the relationship between structure and thermostability in HAD superfamily, Bs-TpNPPase from Bacillus Stearothermophilus was selected. The X-ray crystal structure of Bs-TpNPPase was determined at 1.5A resolution using the molecular replacement phasing method. The structure of Bs-TpNPPase has been deposited and the PDB code is 4KN8. Compared with Bsp, a mesophilic prokaryotic putative p-nitrophenyl phosphatase from Bacillus Subtilis, Bs- TpNPPase showed highly homology but variations in the level of leucine content, aromatic clusters, cation-Pi and hydrophobic interaction. These differences may affect the thermal stability of the protein. The crystal structure of Bs-TpNPPase described herein may serve as a guide to better understand the mechanism of thermostability and provide insights for further mutation work.
嗜热脂肪芽孢杆菌的耐热对硝基苯磷酸酶(Bs-TpNPPase)参与在55°C最佳反应温度下对磷酸酶的Mg(2+)依赖性水解。Bs-TpNPPase已在大肠杆菌M15菌株中克隆并过表达。基于保守的活性位点,该蛋白被认为是卤代烷酸脱卤酶(HAD)超家族的成员。通过分别将催化性的Asp10和Thr43替换为Ala10和Ala43,制备了Bs-TpNPPase的两个位点特异性点突变体。这两个突变体的活性进一步证实Bs-TpNPPase是HAD超家族的成员。HAD超家族可分为四个亚家族,并发挥多种生化作用,如DNA修复、信号转导和次级代谢。为了解HAD超家族中结构与热稳定性之间的关系,选择了嗜热脂肪芽孢杆菌的Bs-TpNPPase。使用分子置换相位法以1.5埃分辨率测定了Bs-TpNPPase的X射线晶体结构。Bs-TpNPPase的结构已存档,PDB代码为4KN8。与来自枯草芽孢杆菌的嗜温原核推定对硝基苯磷酸酶Bsp相比,Bs-TpNPPase显示出高度同源性,但在亮氨酸含量、芳香簇、阳离子-π和疏水相互作用水平上存在差异。这些差异可能会影响该蛋白的热稳定性。本文所述的Bs-TpNPPase的晶体结构可作为更好地理解热稳定性机制的指南,并为进一步的突变工作提供见解。