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本文引用的文献

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Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
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Crystal structure of thermostable p-nitrophenylphosphatase from Bacillus Stearothermophilus (Bs-TpNPPase).嗜热脂肪芽孢杆菌(Bs-TpNPPase)中热稳定对硝基苯磷酸酶的晶体结构。
Protein Pept Lett. 2014 May;21(5):483-9. doi: 10.2174/0929866520666131119200255.
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Thermostability improvement of maltogenic amylase MAUS149 by error prone PCR.易错 PCR 提高麦芽糖淀粉酶 MAUS149 的热稳定性。
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Hydrophobic interaction network analysis for thermostabilization of a mesophilic xylanase.疏水性相互作用网络分析用于嗜温木聚糖酶的热稳定性提高。
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Stabilizing salt-bridge enhances protein thermostability by reducing the heat capacity change of unfolding.稳定盐桥通过降低变性过程的热容变化来增强蛋白质的热稳定性。
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Protein rigidity and thermophilic adaptation.蛋白质刚性与嗜热适应。
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Potential hydrophobic interaction between two cysteines in interior hydrophobic region improves thermostability of a family 11 xylanase from Neocallimastix patriciarum.内部疏水区两个半胱氨酸之间的潜在疏水相互作用提高了 Neocallimastix patriciarum 家族 11 木聚糖酶的耐热性。
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Decision-making in structure solution using Bayesian estimates of map quality: the PHENIX AutoSol wizard.使用图谱质量的贝叶斯估计进行结构解析中的决策:PHENIX AutoSol向导
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嗜热栖热放线菌耐热性对硝基苯磷酸酶His170Tyr突变体的结构

Structure of a His170Tyr mutant of thermostable pNPPase from Geobacillus stearothermophilus.

作者信息

Shen Tiantian, Guo Zheng, Ji Chaoneng

机构信息

State Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Sciences, Fudan University, Shanghai 200433, People's Republic of China.

出版信息

Acta Crystallogr F Struct Biol Commun. 2014 Jun;70(Pt 6):697-702. doi: 10.1107/S2053230X14007341. Epub 2014 May 10.

DOI:10.1107/S2053230X14007341
PMID:24915075
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4051519/
Abstract

Using directed evolution based on random mutagenesis and heat-treated selection, a thermostable His170Tyr mutant of Geobacillus stearothermophilus thermostable p-nitrophenylphosphatase (TpNPPase) was obtained. The temperature at which the His170Tyr mutant lost 50% of its activity (T1/2) was found to be 4.40 K higher than that of wild-type TpNPPase, and the melting temperature of the His170Tyr mutant increased by 2.39 K. The crystal structure of the His170Tyr mutant was then determined at 2.0 Å resolution in the presence of a sodium ion and a sulfate ion in the active site. The cap domain of chain B shows a half-closed conformation. The hydrophobic side chain of the mutated residue, the hydroxyphenyl group, forms a hydrophobic contact with the methyl group of Ala166. This hydrophobic interaction was found using the Protein Interactions Calculator (PIC) web server with an interaction distance of 4.6 Å, and might be a key factor in the thermostabilization of the His170Tyr mutant. This study potentially offers a molecular basis for both investigation of the catalytic mechanism and thermostable protein engineering.

摘要

通过基于随机诱变和热处理筛选的定向进化,获得了嗜热栖热放线菌耐热对硝基苯磷酸酶(TpNPPase)的His170Tyr耐热突变体。发现His170Tyr突变体失去50%活性时的温度(T1/2)比野生型TpNPPase高4.40 K,His170Tyr突变体的解链温度升高了2.39 K。然后在活性位点存在钠离子和硫酸根离子的情况下,以2.0 Å的分辨率测定了His170Tyr突变体的晶体结构。链B的帽结构域呈半封闭构象。突变残基的疏水侧链,即羟基苯基,与Ala166的甲基形成疏水接触。使用蛋白质相互作用计算器(PIC)网络服务器发现这种疏水相互作用的距离为4.6 Å,这可能是His170Tyr突变体热稳定的关键因素。该研究可能为催化机制研究和耐热蛋白质工程提供分子基础。