Shinkai Takumi, Ueki Takaaki, Koike Satoshi, Kobayashi Yasuo
Graduate School of Agriculture, Hokkaido University, Sapporo, Japan.
Anim Sci J. 2014 Mar;85(3):254-61. doi: 10.1111/asj.12145. Epub 2013 Nov 21.
To determine the relationship between Fibrobacter succinogenes and other rumen bacteria, the bacterial community structure on fiber was analyzed by using two different materials. These were ruminally incubated orchard grass hay stems without and with preincubation with F. succinogenes (natural and artificial consortia, respectively). The natural consortium mainly consisted of Firmicutes (56.6%) and Bacteroidetes (33.1%), while the artificial consortium showed a significantly higher proportion of Firmicutes (85.5%) and a lower proportion of Bacteroidetes (4.6%). At species or genus level, Butyrivibrio fibrisolvens, the U2 group, Ruminococcus albus and Lachnospiraceae incertae sedis made up a higher proportion in the artificial consortium. The most dominant bacterial group was the Butyrivibrio-Pseudobutyrivibrio-Lachnospiraceae incertae sedis group, which accounted for 19.7% in the natural and 29.5% in the artificial consortium. Within the genus Butyrivibrio, the phylogenetic groups SA and VA2 and phylogeny-undefined Butyribivrio, but not VA1, were detected at high frequency in the artificial consortium. These results suggest that ecological and possibly functional relationships exist in the rumen among F. succinogenes, a subset of B. fibrisolvens, the U2 group, R. albus and Lachnospiraceae incertae sedis.
为了确定琥珀酸丝状杆菌与其他瘤胃细菌之间的关系,使用两种不同的材料分析了纤维上的细菌群落结构。这两种材料分别是未经琥珀酸丝状杆菌预培养和经过琥珀酸丝状杆菌预培养的瘤胃孵育果园草干草茎(分别为自然菌群和人工菌群)。自然菌群主要由厚壁菌门(56.6%)和拟杆菌门(33.1%)组成,而人工菌群中厚壁菌门的比例显著更高(85.5%),拟杆菌门的比例更低(4.6%)。在物种或属水平上,溶纤维丁酸弧菌、U2组、白色瘤胃球菌和未定科毛螺菌科在人工菌群中占比更高。最主要的细菌类群是丁酸弧菌-假丁酸弧菌-未定科毛螺菌科组,在自然菌群中占19.7%,在人工菌群中占29.5%。在丁酸弧菌属内,系统发育组SA和VA2以及系统发育未定义的丁酸弧菌,但不包括VA1,在人工菌群中被高频检测到。这些结果表明,在瘤胃中,琥珀酸丝状杆菌、溶纤维丁酸弧菌的一个子集、U2组、白色瘤胃球菌和未定科毛螺菌科之间存在生态和可能的功能关系。