Van Zyl L J, Taylor M P, Eley K, Tuffin M, Cowan D A
Institute for Microbial Biotechnology and Metagenomics (IMBM), University of the Western Cape, Modderdam Road, Bellville, Cape Town, South Africa.
Appl Microbiol Biotechnol. 2014 Feb;98(3):1247-59. doi: 10.1007/s00253-013-5380-1. Epub 2013 Nov 26.
This study reports the expression, purification, and kinetic characterization of a pyruvate decarboxylase (PDC) from Gluconobacter oxydans. Kinetic analyses showed the enzyme to have high affinity for pyruvate (120 μM at pH 5), high catalytic efficiency (4.75 × 10(5) M(-1) s(-1) at pH 5), a pHopt of approximately 4.5 and an in vitro temperature optimum at approximately 55 °C. Due to in vitro thermostablity (approximately 40 % enzyme activity retained after 30 min at 65 °C), this PDC was considered to be a suitable candidate for heterologous expression in the thermophile Geobacillus thermoglucosidasius for ethanol production. Initial studies using a variety of methods failed to detect activity at any growth temperature (45-55 °C). However, the application of codon harmonization (i.e., mimicry of the heterogeneous host's transcription and translational rhythm) yielded a protein that was fully functional in the thermophilic strain at 45 °C (as determined by enzyme activity, Western blot, mRNA detection, and ethanol productivity). Here, we describe the first successful expression of PDC in a true thermophile. Yields as high as 0.35 ± 0.04 g/g ethanol per gram of glucose consumed were detected, highly competitive to those reported in ethanologenic thermophilic mutants. Although activities could not be detected at temperatures approaching the growth optimum for the strain, this study highlights the possibility that previously unsuccessful expression of pdcs in Geobacillus spp. may be the result of ineffective transcription/translation coupling.
本研究报道了氧化葡萄糖酸杆菌丙酮酸脱羧酶(PDC)的表达、纯化及动力学特性。动力学分析表明,该酶对丙酮酸具有高亲和力(pH 5时为120 μM)、高催化效率(pH 5时为4.75×10⁵ M⁻¹ s⁻¹),最适pH约为4.5,体外最适温度约为55℃。由于其体外热稳定性(65℃处理30分钟后仍保留约40%的酶活性),该PDC被认为是在嗜热栖热放线杆菌中进行乙醇生产异源表达的合适候选酶。最初使用多种方法进行的研究未能在任何生长温度(45 - 55℃)下检测到活性。然而,通过密码子优化(即模仿异源宿主的转录和翻译节奏)得到的一种蛋白质在嗜热菌株中45℃时具有完全功能(通过酶活性、蛋白质免疫印迹、mRNA检测和乙醇生产率确定)。在此,我们描述了PDC在真正嗜热菌中的首次成功表达。检测到每克消耗的葡萄糖乙醇产量高达0.35±0.04 g/g,与产乙醇嗜热突变体中报道的产量具有高度竞争力。尽管在接近该菌株生长最适温度的条件下未检测到活性,但本研究突出了以前在嗜热栖热放线杆菌中PDC表达未成功可能是转录/翻译偶联无效的结果这一可能性。