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一种研究铜绿假单胞菌外膜组成中 SigX 功能的蛋白质组学方法。

A proteomic approach of SigX function in Pseudomonas aeruginosa outer membrane composition.

机构信息

Laboratory of Microbiology Signal and Microenvironment (LMSM) EA 4312, University of Rouen, GRRs SeSa, IRIB, Evreux F-27000, France.

Cell Imaging Platform of Normandy (PRIMACEN), IRIB, Faculty of Sciences, University of Rouen, Mont-Saint-Aignan F-76821, France.

出版信息

J Proteomics. 2013 Dec 6;94:451-9. doi: 10.1016/j.jprot.2013.10.022. Epub 2013 Oct 26.

Abstract

UNLABELLED

SigX is one of the 19 extracytoplasmic function sigma factors that have been predicted in the human opportunistic pathogen Pseudomonas aeruginosa genome. SigX is involved in the transcription of oprF, encoding the major outer membrane protein OprF, a pleiotropic porin that contributes to the maintaining of the wall structure, and is essential to P. aeruginosa virulence. This study aimed to get further insights into the functions of SigX. We performed here an outer membrane subproteome of a sigX mutant. Proteomic investigations revealed lower production of 8 porins among which 4 gated channels involved in iron or hem uptake, OprF, and the three substrate-specific proteins OprD, OprQ and OprE. On the other side, the glucose-specific porin OprB and the lipid A 3-O-deacylase that is involved in LPS modification were up-regulated. Our results indicate that SigX may be involved in the control and/or regulation of the outer membrane composition.

BIOLOGICAL SIGNIFICANCE

A proteomic approach was used herein to get further insights into SigX functions in P. aeruginosa. The data presented here suggest that SigX is involved in the outer membrane protein composition, and could be linked to a regulatory network involved in OM homeostasis.

摘要

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SigX 是已在人类机会性病原体铜绿假单胞菌基因组中预测的 19 种细胞外功能 σ 因子之一。SigX 参与 oprF 的转录,该基因编码主要外膜蛋白 OprF,OprF 是一种多效性孔蛋白,有助于维持细胞壁结构,对铜绿假单胞菌的毒力至关重要。本研究旨在更深入地了解 SigX 的功能。我们在此对 sigX 突变体的外膜亚蛋白组进行了研究。蛋白质组学研究表明,有 8 种孔蛋白的产量较低,其中 4 种是与铁或血红素摄取有关的门控通道,OprF,以及三种底物特异性蛋白 OprD、OprQ 和 OprE。另一方面,葡萄糖特异性孔蛋白 OprB 和参与 LPS 修饰的脂 A 3-O-脱酰酶被上调。我们的结果表明,SigX 可能参与控制和/或调节外膜组成。

生物学意义

本文采用蛋白质组学方法进一步研究 SigX 在铜绿假单胞菌中的功能。这里呈现的数据表明 SigX 参与外膜蛋白组成,并可能与参与 OM 动态平衡的调节网络有关。

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