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从5S rRNA序列推导反硝化细菌的进化关系。

Evolutionary relationship of denitrifying bacteria as deduced from 5S rRNA sequences.

作者信息

Ohkubo S, Iwasaki H, Hori H, Osawa S

出版信息

J Biochem. 1986 Nov;100(5):1261-7. doi: 10.1093/oxfordjournals.jbchem.a121832.

Abstract

The nucleotide sequences of 5S rRNA from seven denitrifying bacteria have been determined. Based on these sequences and those reported in the literature (including two denitrifiers), a phylogenic tree of 104 eubacterial 5S rRNA sequences has been constructed to establish the position of the denitrifying bacteria. These bacteria belong to either one of the three major subgroups of gram-negative bacteria. The grouping based on 5S rRNA sequences is almost compatible with the type of the nitrite reductases, with the one apparent exception of Paracoccus denitrificans ATCC 13543. Moreover, the separation time of most of the denitrifying bacteria from other non-denitrifying bacteria belonging to the same subgroup is recent. These results suggest that the denitrifying systems in these bacteria would have developed polyphyletically, and not so anciently, during eubacterial evolution.

摘要

已测定了七种反硝化细菌5S rRNA的核苷酸序列。基于这些序列以及文献中报道的序列(包括两种反硝化菌),构建了104种真细菌5S rRNA序列的系统发育树,以确定反硝化细菌的位置。这些细菌属于革兰氏阴性菌的三个主要亚群之一。基于5S rRNA序列的分组与亚硝酸还原酶的类型几乎一致,唯一明显的例外是反硝化副球菌ATCC 13543。此外,大多数反硝化细菌与属于同一亚群的其他非反硝化细菌的分离时间较近。这些结果表明,在真细菌进化过程中,这些细菌中的反硝化系统可能是多系发育的,且并非古老起源。

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