Tareen Semih U, Nicolai Christopher J, Campbell David J, Flynn Patrick A, Slough Megan M, Vin Chintan D, Kelley-Clarke Brenna, Odegard Jared M, Robbins Scott H
Immune Design Corporation , Seattle, Washington.
Immune Design Corporation , Seattle, Washington. ; TRIA Bioscience Corporation , Seattle, Washington.
Biores Open Access. 2013 Dec 1;2(6):421-30. doi: 10.1089/biores.2013.0037.
Lentiviral vectors (LVs) are being developed for clinical use in humans for applications including gene therapy and immunotherapy. A safety concern for use of LVs in humans is the generation of replication-competent lentivirus (RCL), which may arise due to recombination between the split genomes of third-generation LVs. Although no RCL has been detected to date, design optimizations that minimize recombination events between split genome vectors would provide an added safety benefit that may further reduce the risk of RCL formation. Here we describe design elements introduced to the gag/pol plasmid with the intention of eliminating psi-gag recombination between the vector genome and gag/pol. These design changes, consisting of codon optimization of the gag/pol sequence and the deletion of the Rev-responsive element, abrogate the requirement for Rev in expression of Gag protein, thus the resulting gag/pol construct being Rev independent (RI gag/pol). We show that generating vector using the RI gag/pol construct has no effect on particle production or transduction titers. The RI and wild-type gag/pol vectors function equivalently as antigen-specific immunotherapy, potently inducing antigen-specific CD8 T cells that protect against challenge with vaccinia virus. Most importantly, the designed RI gag/pol eliminated detectable psi-gag recombination. Interestingly, we detected recombination between the vector genome and gag/pol from regions without sequence homology. Our findings imply that although unpredictable recombination events may still occur, the RI gag/pol design is sufficient to prevent psi-gag recombination.
慢病毒载体(LVs)正在被开发用于人类临床,应用包括基因治疗和免疫治疗。在人类使用LVs的一个安全问题是产生具有复制能力的慢病毒(RCL),这可能由于第三代LVs的分裂基因组之间的重组而出现。尽管迄今为止尚未检测到RCL,但将分裂基因组载体之间的重组事件降至最低的设计优化将提供额外的安全益处,可能进一步降低RCL形成的风险。在这里,我们描述了引入gag/pol质粒的设计元件,目的是消除载体基因组与gag/pol之间的ψ-gag重组。这些设计改变包括gag/pol序列的密码子优化和Rev反应元件的缺失,消除了Rev在Gag蛋白表达中的需求,因此产生的gag/pol构建体是Rev非依赖型(RI gag/pol)。我们表明,使用RI gag/pol构建体产生载体对颗粒产生或转导滴度没有影响。RI和野生型gag/pol载体作为抗原特异性免疫疗法具有同等功能,能有效诱导抗原特异性CD8 T细胞,从而预防痘苗病毒攻击。最重要的是,设计的RI gag/pol消除了可检测到的ψ-gag重组。有趣的是,我们在没有序列同源性的区域检测到了载体基因组与gag/pol之间的重组。我们的发现表明,尽管仍可能发生不可预测的重组事件,但RI gag/pol设计足以防止ψ-gag重组。