Tsang Ling Ming, Shen Xin, Chu Ka Hou, Chan Benny Kwok Kan
a Institute of Marine Biology, National Taiwan Ocean University , Keelung , Taiwan .
b Simon F. S. Li Marine Science Laboratory , School of Life Sciences, Chinese University of Hong Kong , Shatin, N.T. , Hong Kong , China .
Mitochondrial DNA. 2015;26(5):761-2. doi: 10.3109/19401736.2013.855739. Epub 2014 Jan 7.
The mitochondrial genome of the barnacle Striatobalanus amaryllis (Sessilia: family Archaeobalanidae) is 15,063 bp in length. All the 13 protein-coding genes (PCGs) initiate with ATD codon (ATG, ATA or ATT). Four PCGs (COX3, ND3, ND4 and ND4L) end with incomplete stop codon (T- -). Four PCGs (ND1, ND4, ND4L and ND5) are encoded on the light strand (underlined below). Refer to the pancrustacean ground pattern, there are not less than seven tRNAs rearranged in the S. amaryllis mitochondrial genome, including tRNA(Ala), tRNA(Glu)/tRNA(Ser)((AGY)), tRNA(Pro)/tRNA(Thr), tRNA(Pro)/tRNA(Thr), tRNA(Tyr), tRNA(Lys), tRNA(Gln) and tRNA(Cys). Three tRNAs (tRNA(Lys), tRNA(Gln) and tRNA(Cys)) are rearranged between S. amaryllis and Tetraclita japonica (Sessilia: Tetraclitidae), meanwhile one tRNA (tRNA(Cys)) inverted from one strand to another. Compared with Megabalanus volcano (Sessilia: Balanidae), an inversion of one large gene block is identified (including three PCGs and three tRNAs) in S. amaryllis mitochondrial genome: tRNA(Phe)-ND5-tRNA(His)-ND4-ND4L-tRNA(Pro).
茗荷儿(Sessilia:古藤壶科)的线粒体基因组长度为15,063 bp。所有13个蛋白质编码基因(PCG)均以ATD密码子(ATG、ATA或ATT)起始。四个PCG(COX3、ND3、ND4和ND4L)以不完全终止密码子(T--)结束。四个PCG(ND1、ND4、ND4L和ND5)在轻链上编码(以下加下划线)。参照泛甲壳动物的基本模式,茗荷儿线粒体基因组中至少有7个tRNA发生了重排,包括tRNA(Ala)、tRNA(Glu)/tRNA(Ser)((AGY))、tRNA(Pro)/tRNA(Thr)、tRNA(Pro)/tRNA(Thr)、tRNA(Tyr)、tRNA(Lys)、tRNA(Gln)和tRNA(Cys)。茗荷儿和日本笠藤壶(Sessilia:笠藤壶科)之间有三个tRNA(tRNA(Lys)、tRNA(Gln)和tRNA(Cys))发生了重排,同时有一个tRNA(tRNA(Cys))从一条链倒转到了另一条链。与火山巨藤壶(Sessilia:藤壶科)相比,在茗荷儿线粒体基因组中鉴定出一个大基因块的倒位(包括三个PCG和三个tRNA):tRNA(Phe)-ND5-tRNA(His)-ND4-ND4L-tRNA(Pro)。