Wen Cheng, Ye Anpei
Key Laboratory for the Physics & Chemistry of Nano-devices, School of Electronic Engineering & Computer Science, Peking University, Beijing 100871, China ; School of Lifescience, Peking University, Beijing 100871, China.
Key Laboratory for the Physics & Chemistry of Nano-devices, School of Electronic Engineering & Computer Science, Peking University, Beijing 100871, China.
Biomed Opt Express. 2013 Nov 14;4(12):2835-45. doi: 10.1364/BOE.4.002835. eCollection 2013.
BRaf (B- Rapid Accelerated Fibrosarcoma) protein is an important serine/threonine-protein kinase. Two domains on BRaf can independently bind its upstream kinase, Ras (Rat Sarcoma) protein. These are the Ras binding domain (RBD) and cysteine-rich-domain (CRD). Herein we use customized optical tweezers to compare the Ras binding process in two pathological mutants of BRaf responsible for CFC syndrome, abbreviated BRaf (A246P) and BRaf (Q257R). The two mutants differ in their kinetics of Ras-binding, though both bind Ras with similar increased overall affinity. BRaf (A246P) exhibits a slightly higher Ras/CRD unbinding force and a significantly higher Ras/RBD unbinding force versus the wild type. The contrary phenomenon is observed in the Q257R mutation. Simulations of the unstressed-off rate, koff (0), yield results in accordance with the changes revealed by the mean unbinding force. Our approach can be applied to rapidly assess other mutated proteins to deduce the effects of mutation on their kinetics compared to wild type proteins and to each other.
BRAF(B型快速加速纤维肉瘤)蛋白是一种重要的丝氨酸/苏氨酸蛋白激酶。BRAF上的两个结构域可独立结合其上游激酶RAS(大鼠肉瘤)蛋白。这两个结构域分别是RAS结合结构域(RBD)和富含半胱氨酸结构域(CRD)。在此,我们使用定制的光镊来比较导致CFC综合征的BRAF两个病理突变体(简称为BRAF(A246P)和BRAF(Q257R))中的RAS结合过程。这两个突变体在RAS结合动力学方面存在差异,尽管它们与RAS结合时的总体亲和力都有类似程度的增加。与野生型相比,BRAF(A246P)表现出略高的RAS/CRD解离力和显著更高的RAS/RBD解离力。在Q257R突变中观察到相反的现象。对无应力解离速率koff(0)的模拟结果与平均解离力所揭示的变化一致。我们的方法可用于快速评估其他突变蛋白,以推断突变对其动力学的影响,与野生型蛋白相比以及相互之间的影响。