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Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities.宏基因组 16S rDNA Illumina 标签是一种强大的替代扩增子测序的方法,可用于探索微生物群落的多样性和结构。
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Dispersion by Pseudomonas aeruginosa requires an unusual posttranslational modification of BdlA.铜绿假单胞菌的分散需要 BdlA 的一种不寻常的翻译后修饰。
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Acyl homoserine lactone-based quorum sensing in a methanogenic archaeon.基于酰基高丝氨酸内酯的产甲烷古菌群体感应。
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Should we stay or should we go: mechanisms and ecological consequences for biofilm dispersal.我们是该留下还是离开:生物膜分散的机制和生态后果。
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Isovaleryl-homoserine lactone, an unusual branched-chain quorum-sensing signal from the soybean symbiont Bradyrhizobium japonicum.来自大豆共生菌根瘤菌(Bradyrhizobium japonicum)的一种不寻常的支链链寡肽群体感应信号:异戊酰基高丝氨酸内酯。
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Selectively inducing the synthesis of a key structural exopolysaccharide in aerobic granules by enriching for Candidatus "Competibacter phosphatis".通过富集“磷可利用菌”选择性诱导好氧颗粒中关键结构胞外多糖的合成。
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Aryl-homoserine lactone quorum sensing in stem-nodulating photosynthetic bradyrhizobia.芳基-同型高丝氨酸内酯群体感应在茎瘤固氮光合慢生根瘤菌中。
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Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions.使用串联可变 16S rRNA 基因区域比较两种下一代测序技术对高度复杂微生物群落组成的解析。
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群体感应信号在 EPS 生产和污泥群落组装为好氧颗粒中的作用。

The role of quorum sensing signalling in EPS production and the assembly of a sludge community into aerobic granules.

机构信息

1] Singapore Centre on Environmental Life Sciences Engineering (SCELSE), Nanyang Technological University, Singapore [2] Advanced Environmental Biotechnology Centre (AEBC), Nanyang Environment and Water Research Institute (NEWRI), Nanyang Technological University, Singapore [3] The School of Civil and Environmental Engineering, Nanyang Technological University, Singapore.

Singapore Centre on Environmental Life Sciences Engineering (SCELSE), Nanyang Technological University, Singapore.

出版信息

ISME J. 2014 Jun;8(6):1186-97. doi: 10.1038/ismej.2013.240. Epub 2014 Jan 16.

DOI:10.1038/ismej.2013.240
PMID:24430488
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4030234/
Abstract

Quorum sensing (QS) signalling has been extensively studied in single species populations. However, the ecological role of QS in complex, multi-species communities, particularly in the context of community assembly, has neither been experimentally explored nor theoretically addressed. Here, we performed a long-term bioreactor ecology study to address the links between QS, organization and composition of complex microbial communities. The conversion of floccular biomass to highly structured granules was found to be non-random, but strongly and positively correlated with N-acyl-homoserine-lactone (AHL)-mediated QS. Specific AHLs were elevated up to 100-fold and were strongly associated with the initiation of granulation. Similarly, the levels of particular AHLs decreased markedly during the granular disintegration phase. Metadata analysis indicated that granulation was accompanied by changes in extracellular polymeric substance (EPS) production and AHL add-back studies also resulted in increased EPS synthesis. In contrast to the commonly reported nanomolar to micromolar signal concentrations in pure culture laboratory systems, QS signalling in the granulation ecosystem occurred at picomolar to nanomolar concentrations of AHLs. Given that low concentrations of AHLs quantified in this study were sufficient to activate AHL bioreporters in situ in complex granular communities, AHL mediated QS may be a common feature in many natural and engineered ecosystems, where it coordinates community behaviour.

摘要

群体感应 (QS) 信号在单一物种群体中得到了广泛研究。然而,QS 在复杂的多物种群落中的生态作用,特别是在群落组装的背景下,既没有经过实验探索,也没有在理论上解决。在这里,我们进行了一项长期的生物反应器生态学研究,以探讨 QS 与复杂微生物群落的组织和组成之间的联系。絮状生物量向高度结构化颗粒的转化是非随机的,但与 N-酰基高丝氨酸内酯 (AHL) 介导的 QS 强烈正相关。特定的 AHL 被提高了 100 倍,与颗粒形成的启动密切相关。同样,特定 AHL 的水平在颗粒崩解阶段显著下降。元数据分析表明,颗粒化伴随着细胞外聚合物物质 (EPS) 产生的变化,AHL 添加回补研究也导致 EPS 合成增加。与在纯培养实验室系统中通常报道的纳摩尔到微摩尔信号浓度相比,在颗粒化生态系统中,QS 信号发生在皮摩尔到纳摩尔浓度的 AHL 下。鉴于本研究中定量的低浓度 AHL 足以激活复杂颗粒群落中现场的 AHL 生物报告基因,AHL 介导的 QS 可能是许多自然和工程生态系统中的一个共同特征,在这些系统中,它协调着群落行为。