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神经保护剂家族双环衍生物的晶体结构分析与升华热力学

Crystal structure analysis and sublimation thermodynamics of bicyclo derivatives of a neuroprotector family.

作者信息

Surov Artem O, Proshin Alexey N, Perlovich German L

机构信息

Krestov's Institute of Solution Chemistry, Russian Academy of Sciences, Ivanovo 153045, Russian Federation.

Institute of Physiologically Active Compounds, Russian Academy of Sciences, Chernogolovka 142432, Russian Federation.

出版信息

Acta Crystallogr B Struct Sci Cryst Eng Mater. 2014 Feb;70(Pt 1):47-53. doi: 10.1107/S2052520613024384. Epub 2013 Dec 10.

DOI:10.1107/S2052520613024384
PMID:24441127
Abstract

The crystal structures of three new structurally related drug-like bicyclo derivatives are correlated with measured thermodynamic quantities for their sublimation and melting processes. The sublimation thermodynamics are determined using the temperature dependencies of the vapour pressure, and the melting processes are examined using differential scanning calorimetry. The three compounds contain a common N-(3-thia-1-azabicyclo[3.3.1]non-2-ylidene)aniline core, with either a CH3, F or CF3 substituent at the 4-position of the aniline ring. Lattice energy calculations are made using both the PIXEL and Coulomb-London-Pauli (CLP) models, and the conformational flexibility of the molecules is examined using gas-phase density functional theory (DFT) calculations. The experimentally measured crystal lattice energies (ΔH(0)sub) decrease in the order: CH3 > F > CF3. The calculated lattice energies using the PIXEL approach are in good agreement with the experimental values, and the partitioned intermolecular interaction energies suggest that dispersion contributions dominate the crystal structures of all three compounds. The sublimation energies and melting points are inversely correlated for the three molecules, with the melting points increasing in the order CF3 < F < CH3.

摘要

三种新的结构相关的类药物双环衍生物的晶体结构与其升华和熔化过程的测量热力学量相关。升华热力学通过蒸气压的温度依赖性来确定,熔化过程则使用差示扫描量热法进行研究。这三种化合物含有一个共同的N-(3-硫杂-1-氮杂双环[3.3.1]壬-2-亚基)苯胺核心,在苯胺环的4-位上有一个CH3、F或CF3取代基。使用PIXEL和库仑-伦敦-泡利(CLP)模型进行晶格能计算,并使用气相密度泛函理论(DFT)计算来研究分子的构象灵活性。实验测量的晶格能(ΔH(0)sub)按以下顺序降低:CH3 > F > CF3。使用PIXEL方法计算的晶格能与实验值吻合良好,且分子间相互作用能的分配表明色散作用在所有三种化合物的晶体结构中占主导地位。这三种分子的升华能和熔点呈负相关,熔点按CF3 < F < CH3的顺序升高。

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