Department of Human Genetics, Leiden University Medical Center (LUMC), RC, Leiden, The Netherlands.
Proteomics Clin Appl. 2014 Apr;8(3-4):269-78. doi: 10.1002/prca.201300072. Epub 2014 Mar 11.
To identify and validate serum biomarkers for the progression of Duchenne muscular dystrophy (DMD) using a MS-based bottom-up pipeline.
We used a bottom-up proteomics approach, including a protein concentration equalization step, different proteolytic digestions, and MS detection schemes, to identify candidate biomarkers in serum samples from control subjects and DMD patients. Fibronectin was chosen for follow-up based on the differences in peptide spectral counts and sequence coverage observed between the DMD and control groups. Subsequently, fibronectin levels were determined with ELISA in 68 DMD patients, 38 milder Becker muscular dystrophy patients, 33 patients with other neuromuscular disorders, and 15 age-matched adult and child controls.
There was a significant increase in fibronectin levels in DMD patients compared to age-matched controls. Fibronectin levels in patients with Becker muscular dystrophy, Bethlem myopathy, or myasthenia gravis were comparable to control levels. Progressive elevation in fibronectin levels was observed in longitudinal samples from 22 DMD patients followed up for a period of 6 months up to 4 years.
This study suggests that serum fibronectin levels may constitute a promising biomarker to monitor disease progression in DMD patients.
使用基于 MS 的自上而下的管道,鉴定和验证杜氏肌营养不良症 (DMD) 进展的血清生物标志物。
我们使用了一种自上而下的蛋白质组学方法,包括蛋白质浓度均化步骤、不同的蛋白水解消化和 MS 检测方案,以鉴定来自对照组和 DMD 患者的血清样本中的候选生物标志物。根据 DMD 和对照组之间观察到的肽谱计数和序列覆盖的差异,选择纤维连接蛋白进行后续研究。随后,使用 ELISA 法在 68 名 DMD 患者、38 名轻度贝氏肌营养不良症患者、33 名其他神经肌肉疾病患者和 15 名年龄匹配的成人和儿童对照者中测定纤维连接蛋白水平。
与年龄匹配的对照组相比,DMD 患者的纤维连接蛋白水平显著升高。贝氏肌营养不良症、Bethlem 肌病或重症肌无力患者的纤维连接蛋白水平与对照水平相当。在 22 名 DMD 患者的纵向样本中观察到纤维连接蛋白水平的进行性升高,随访时间为 6 个月至 4 年。
本研究表明,血清纤维连接蛋白水平可能是监测 DMD 患者疾病进展的有前途的生物标志物。