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从食土白蚁肠道中分离出的嗜碱且能分解木聚糖的芽孢杆菌属菌株JCM 10914的基因组序列草图

Draft Genome Sequence of the Alkaliphilic and Xylanolytic Paenibacillus sp. Strain JCM 10914, Isolated from the Gut of a Soil-Feeding Termite.

作者信息

Ohkuma Moriya, Yuki Masahiro, Oshima Kenshiro, Suda Wataru, Oshida Yumi, Kitamura Keiko, Iida Toshiya, Hattori Masahira

机构信息

Japan Collection of Microorganisms/Microbe Division, RIKEN BioResource Center, Tsukuba, Japan.

出版信息

Genome Announc. 2014 Jan 23;2(1):e01144-13. doi: 10.1128/genomeA.01144-13.

DOI:10.1128/genomeA.01144-13
PMID:24459258
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3900890/
Abstract

Panibacillus sp. strain JCM 10914 is a xylanolytic alkaliphile isolated from the gut of a soil-feeding termite. Its draft genome sequence revealed various genes for hydrolytic enzymes and will facilitate studies on adaptation to the highly alkaline gut environment and its role in digesting soil organic matter in the gut.

摘要

泛芽孢杆菌属菌株JCM 10914是从取食土壤的白蚁肠道中分离出的一种木聚糖分解嗜碱菌。其基因组草图序列揭示了多种水解酶基因，将有助于研究其对高碱性肠道环境的适应性及其在肠道中消化土壤有机质的作用。

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引用本文的文献

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Genome analysis of Paenibacillus polymyxa A18 gives insights into the features associated with its adaptation to the termite gut environment.聚多黏菌素芽胞杆菌 A18 的基因组分析揭示了其适应白蚁肠道环境的相关特征。
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本文引用的文献

1
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics.碳水化合物活性酶数据库（CAZy）：糖原组学的专业资源。
Nucleic Acids Res. 2009 Jan;37(Database issue):D233-8. doi: 10.1093/nar/gkn663. Epub 2008 Oct 5.
2
The RAST Server: rapid annotations using subsystems technology.RAST服务器：使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
3
Alkaliphiles: some applications of their products for biotechnology.嗜碱菌：其产物在生物技术中的一些应用
Microbiol Mol Biol Rev. 1999 Dec;63(4):735-50, table of contents. doi: 10.1128/MMBR.63.4.735-750.1999.