Department of Biophysics and Chemical Biology, Seoul National University, Seoul, Republic of Korea.
Institute for Protein Research, Osaka University, Suita, Japan.
Biophys J. 2014 Jan 21;106(2):390-8. doi: 10.1016/j.bpj.2013.12.005.
FoF1-ATP synthase uses the electrochemical potential across membranes or ATP hydrolysis to rotate the Foc-subunit ring. To elucidate the underlying mechanism, we carried out a structural analysis focused on the active site of the thermophilic c-subunit (TFoc) ring in membranes with a solid-state NMR method developed for this purpose. We used stereo-array isotope labeling (SAIL) with a cell-free system to highlight the target. TFoc oligomers were purified using a virtual ring His tag. The membrane-reconstituted TFoc oligomer was confirmed to be a ring indistinguishable from that expressed in E. coli on the basis of the H(+)-translocation activity and high-speed atomic force microscopic images. For the analysis of the active site, 2D (13)C-(13)C correlation spectra of TFoc rings labeled with SAIL-Glu and -Asn were recorded. Complete signal assignment could be performed with the aid of the C(α)i+1-C(α)i correlation spectrum of specifically (13)C,(15)N-labeled TFoc rings. The C(δ) chemical shift of Glu-56, which is essential for H(+) translocation, and related crosspeaks revealed that its carboxyl group is protonated in the membrane, forming the H(+)-locked conformation with Asn-23. The chemical shift of Asp-61 C(γ) of the E. coli c ring indicated an involvement of a water molecule in the H(+) locking, in contrast to the involvement of Asn-23 in the TFoc ring, suggesting two different means of proton storage in the c rings.
FoF1-ATP 合酶利用膜两侧的电化学势或 ATP 水解来旋转 Foc 亚基环。为了阐明其潜在机制,我们使用为此目的开发的固态 NMR 方法,对膜中耐热 c 亚基 (TFoc) 环的活性部位进行了结构分析。我们使用无细胞系统中的立体阵列同位素标记 (SAIL) 来突出目标。使用虚拟环 His 标签纯化 TFoc 寡聚物。根据 H(+)-转运活性和高速原子力显微镜图像,证实膜重组的 TFoc 寡聚物与在大肠杆菌中表达的寡聚物相同。为了分析活性部位,我们记录了用 SAIL-Glu 和 -Asn 标记的 TFoc 环的 2D(13)C-(13)C 相关谱。在专门(13)C、(15)N 标记的 TFoc 环的 C(α)i+1-C(α)i 相关谱的辅助下,可以进行完整的信号分配。Glu-56 的 C(δ)化学位移对于 H(+)转运至关重要,相关交叉峰表明其羧基在膜中质子化,与 Asn-23 形成 H(+)锁定构象。E. coli c 环中 Asp-61 C(γ)的化学位移表明水分子参与 H(+)锁定,与 TFoc 环中的 Asn-23 不同,表明 c 环中存在两种不同的质子存储方式。