Department of Plant and Environmental Sciences, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Givat-Ram, Jerusalem, 91904, Israel.
Plant J. 2014 Apr;78(2):253-68. doi: 10.1111/tpj.12466. Epub 2014 Mar 26.
Group II introns are large catalytic RNAs that are found in bacteria and organellar genomes of lower eukaryotes, but are particularly prevalent within mitochondria in plants, where they are present in many critical genes. The excision of plant mitochondrial introns is essential for respiratory functions, and is facilitated in vivo by various protein cofactors. Typical group II introns are classified as mobile genetic elements, consisting of the self-splicing ribozyme and its own intron-encoded maturase protein. A hallmark of maturases is that they are intron-specific, acting as cofactors that bind their intron-containing pre-RNAs to facilitate splicing. However, the degeneracy of the mitochondrial introns in plants and the absence of cognate intron-encoded maturase open reading frames suggest that their splicing in vivo is assisted by 'trans'-acting protein factors. Interestingly, angiosperms harbor several nuclear-encoded maturase-related (nMat) genes that contain N-terminal mitochondrial localization signals. Recently, we established the roles of two of these paralogs in Arabidopsis, nMAT1 and nMAT2, in the splicing of mitochondrial introns. Here we show that nMAT4 (At1g74350) is required for RNA processing and maturation of nad1 introns 1, 3 and 4 in Arabidopsis mitochondria. Seed germination, seedling establishment and development are strongly affected in homozygous nmat4 mutants, which also show modified respiration phenotypes that are tightly associated with complex I defects.
Group II 内含子是在细菌和低等真核生物的细胞器基因组中发现的大型催化 RNA,但在植物的线粒体中特别普遍,它们存在于许多关键基因中。植物线粒体内含子的切除对呼吸功能至关重要,各种蛋白质辅助因子在体内促进了这一过程。典型的 Group II 内含子被归类为移动遗传元件,由自我剪接核酶及其自身内含子编码的成熟酶蛋白组成。成熟酶的一个特点是它们是内含子特异性的,作为辅助因子,它们与包含内含子的 pre-RNAs 结合,促进剪接。然而,植物线粒体内含子的简并性和缺乏同源内含子编码的成熟酶开放阅读框表明,它们在体内的剪接是由“反式”作用蛋白因子辅助的。有趣的是,被子植物拥有几个核编码的成熟酶相关(nMat)基因,这些基因包含 N 端线粒体定位信号。最近,我们确定了这两个拟南芥基因 nMAT1 和 nMAT2 在植物线粒体内含子剪接中的作用。在这里,我们表明 nMAT4(At1g74350)在拟南芥线粒体 nad1 内含子 1、3 和 4 的 RNA 加工和成熟中是必需的。在纯合 nmat4 突变体中,种子萌发、幼苗建立和发育受到强烈影响,呼吸表型也发生改变,与复合物 I 缺陷密切相关。