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使用DNA扩增合成寡核苷酸程序鉴定Aγ-(或Gγ-)β⁺-HPFH杂合子中Aγ-和Gγ-珠蛋白基因启动子区域的碱基置换。

Identification of base substitutions in the promoter regions of the A gamma- and G gamma-globin genes in A gamma- (or G gamma-) beta+-HPFH heterozygotes using the DNA-amplification-synthetic oligonucleotide procedure.

作者信息

Yang K G, Stoming T A, Fei Y J, Liang S, Wong S C, Masala B, Huang R B, Wei Z P, Huisman T H

机构信息

Department of Cell and Molecular Biology, Medical College of Georgia, Augusta 30912-2100.

出版信息

Blood. 1988 May;71(5):1414-7.

PMID:2451950
Abstract

DNA amplification combined with hybridization with 32P-labeled synthetic oligonucleotide probes has been used to identify base substitutions in the 5' promoter region of the A gamma globin gene in members of eleven families from China, Sardinia, Canada, and the United States who had a heterozygosity for the A gamma-beta+-hereditary persistence of fetal hemoglobin (HPFH), and in members of six black families with a possible G gamma-beta+-HPFH heterozygosity. All three known A gamma types were observed, ie, the British type (-198, T----C), the Chinese type (-196, C----T), and the Green type (-117, G----A); the latter has been found in a black family. Of the six families with G gamma-beta+-HPFH, three had C----G at -202 and none T----C -175. Conditions for hybridization of amplified DNA with the specific probes are provided and the usefulness of the technique is discussed. The increase in numbers of A gamma(G gamma)-beta+-HPFH heterozygotes with specific base substitutions greatly enhances the probability of a direct correlation between these substitutions and the increase in the production of a specific gamma chain.

摘要

DNA扩增结合与32P标记的合成寡核苷酸探针杂交,已被用于鉴定来自中国、撒丁岛、加拿大和美国的11个家庭中具有Aγ-β+-遗传性胎儿血红蛋白持续存在(HPFH)杂合性的成员以及6个可能具有Gγ-β+-HPFH杂合性的黑人家庭成员的Aγ珠蛋白基因5'启动子区域的碱基替换。观察到了所有三种已知的Aγ类型,即英国型(-198,T→C)、中国型(-196,C→T)和格林型(-117,G→A);后者在一个黑人家庭中被发现。在6个具有Gγ-β+-HPFH的家庭中,3个在-202处有C→G,没有一个在-175处有T→C。提供了扩增DNA与特异性探针杂交的条件,并讨论了该技术的实用性。具有特定碱基替换的Aγ(Gγ)-β+-HPFH杂合子数量的增加大大提高了这些替换与特定γ链产生增加之间直接关联的可能性。

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Nucleic Acids Res. 1989 Dec 25;17(24):10231-41. doi: 10.1093/nar/17.24.10231.
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The deletion of the distal CCAAT box region of the A gamma-globin gene in black HPFH abolishes the binding of the erythroid specific protein NFE3 and of the CCAAT displacement protein.
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Nucleic Acids Res. 1989 Aug 25;17(16):6681-91. doi: 10.1093/nar/17.16.6681.
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Compound heterozygosity for a beta zero-thalassemia (frameshift codons 38/39; -C) and a nondeletional Swiss type of HPFH (A----C at NT -110, G gamma) in a Czechoslovakian family.一个捷克斯洛伐克家庭中,β0地中海贫血(移码密码子38/39;-C)和非缺失型瑞士型遗传性胎儿血红蛋白持续存在症(核苷酸-110处A→C,Gγ)的复合杂合性。
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