Giacobbe Simona, Vincent Florence, Faraco Vincenza
Department of Chemical Sciences, University of Naples "Federico II", Complesso Universitario Monte S. Angelo, via Cintia, 4 80126 Naples, Italy.
CNRS, UMR7257, Aix-Marseille Universite, 163 Avenue de Luminy, Case 932, 13288 Marseille cedex 09, France.
N Biotechnol. 2014 May 25;31(3):230-6. doi: 10.1016/j.nbt.2014.02.004. Epub 2014 Feb 22.
In this study, the α-l-arabinofuranosidase from Pleurotus ostreatus was subjected to directed evolution by expressing a library of around 7000 randomly mutated variants by error prone Polymerase Chain Reaction. High-throughput screening of the library for the most active variants was performed by assaying activity towards p-nitrophenyl α-l-arabinofuranoside, and a variant with higher activity than the wild type was selected, purified and characterised. It exhibited a kcat of 7.3 ×1 0¹ ± 0.3 min⁻¹, around 3-fold higher than that of the wild type (2.2 × 10³ ± 0.2 min⁻¹), and a KM (0.54 ± 0.0 6mM) 30% lower than that of the wild type (0.70 ± 0.05 mM) towards this substrate. The mutant also showed improved catalytic properties towards pNP-β-d-glucopyranoside (kcat of 50.85 ± 0.21 min⁻¹ versus 11.0 ± 0.6 min⁻¹) and it was shown able to hydrolyse larch arabinogalactan which is not recognised by the wild type. The mutant was also more active than the wild type towards arabinoxylan and was able to hydrolyse arabinan, which was not transformed by the wild type. The ability of rPoAbf F435Y/Y446F to hydrolyse these insoluble substrates expands its potential for application also to hemicelluloses, which in some types of pretreatment are recovered in solid fractions.
在本研究中,通过易错聚合酶链式反应表达约7000个随机突变变体的文库,对平菇来源的α-L-阿拉伯呋喃糖苷酶进行定向进化。通过检测对对硝基苯基α-L-阿拉伯呋喃糖苷的活性,对该文库进行高通量筛选以获得活性最高的变体,并选择、纯化和表征了一种活性高于野生型的变体。它的催化常数kcat为7.3×10¹±0.3 min⁻¹,比野生型(2.2×10³±0.2 min⁻¹)高约3倍,对该底物的米氏常数KM(0.54±0.06 mM)比野生型(0.70±0.05 mM)低30%。该突变体对对硝基苯基-β-D-吡喃葡萄糖苷也表现出改善的催化特性(催化常数kcat为50.85±0.21 min⁻¹,而野生型为11.0±0.6 min⁻¹),并且能够水解野生型无法识别的落叶松阿拉伯半乳聚糖。该突变体对阿拉伯木聚糖的活性也高于野生型,并且能够水解野生型无法转化的阿拉伯聚糖。重组平菇α-L-阿拉伯呋喃糖苷酶F435Y/Y446F水解这些不溶性底物的能力扩展了其在半纤维素中的应用潜力,在某些类型的预处理中,半纤维素会在固体部分中回收。