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使用多重实时聚合酶链反应检测法从培养基中直接鉴定分枝杆菌:在结核病高流行地区临床实验室的应用报告

Direct identification of mycobacteria from culture media using a multiplex real-time PCR assay: report on its application in a clinical laboratory in a region of high tuberculosis endemicity.

作者信息

Cha Choong-Hwan, An Hae-Kyong, Kim Jeong-Uk

机构信息

Department of Laboratory Medicine, Gangneung Asan Hospital, University of Ulsan College of Medicine, 415, Bangdong-ri, Sacheon-myeon, Gangeung-si, Gangwon-do, 210-711, Korea.

Department of Laboratory Medicine, Gangneung Asan Hospital, University of Ulsan College of Medicine, 415, Bangdong-ri, Sacheon-myeon, Gangeung-si, Gangwon-do, 210-711, Korea.

出版信息

Diagn Microbiol Infect Dis. 2014 May;79(1):49-53. doi: 10.1016/j.diagmicrobio.2014.01.009. Epub 2014 Jan 24.

DOI:10.1016/j.diagmicrobio.2014.01.009
PMID:24565848
Abstract

There are few commercial assays that easily and correctly identify the mycobacteria from culture in a clinical laboratory with a high workload. Thus, we developed and evaluated a scheme for the identification of mycobacteria using a multiplex real-time PCR assay and report on its application in our laboratory. The scheme consisted of 3 stepwise PCRs. Mycobacterium tuberculosis complex (MTC) and nontuberculous mycobacteria (NTM) were differentially detected in the step 1 PCR, and the NTM species were identified in the step 2 and 3 PCRs. Over the 1.5-year study period, 1136 isolates of MTC and 618 isolates of NTM were detected, and the species of 608 (98.4%) of the 618 NTM isolates were identified. We conclude that the established scheme is a very useful diagnostic approach for the rapid and accurate identification of MTC and clinically relevant NTM in a clinical laboratory in a region where tuberculosis is endemic.

摘要

在工作量较大的临床实验室中,能够轻松且正确地从培养物中鉴定出分枝杆菌的商业检测方法很少。因此,我们开发并评估了一种使用多重实时PCR检测法鉴定分枝杆菌的方案,并报告了其在我们实验室中的应用情况。该方案由3个逐步进行的PCR组成。在第1步PCR中对结核分枝杆菌复合群(MTC)和非结核分枝杆菌(NTM)进行差异检测,在第2步和第3步PCR中鉴定NTM的种类。在为期1.5年的研究期间,共检测到1136株MTC菌株和618株NTM菌株,618株NTM菌株中的608株(98.4%)被鉴定出种类。我们得出结论,在结核病流行地区的临床实验室中,所建立的方案是一种非常有用的诊断方法,可用于快速准确地鉴定MTC和临床相关的NTM。

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