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基于细微形态差异的分类学与巨大的遗传距离完美对应:原尾纲(六足亚门)的DNA条形码技术

Where taxonomy based on subtle morphological differences is perfectly mirrored by huge genetic distances: DNA barcoding in Protura (Hexapoda).

作者信息

Resch Monika Carol, Shrubovych Julia, Bartel Daniela, Szucsich Nikolaus U, Timelthaler Gerald, Bu Yun, Walzl Manfred, Pass Günther

机构信息

Department of Integrative Zoology, University of Vienna, Vienna, Austria.

Institute of Systematics and Evolution of Animals, Polish Academy of Sciences, Krakow, Poland.

出版信息

PLoS One. 2014 Mar 7;9(3):e90653. doi: 10.1371/journal.pone.0090653. eCollection 2014.

Abstract

BACKGROUND

Protura is a group of tiny, primarily wingless hexapods living in soil habitats. Presently about 800 valid species are known. Diagnostic characters are very inconspicuous and difficult to recognize. Therefore taxonomic work constitutes an extraordinary challenge which requires special skills and experience. Aim of the present pilot project was to examine if DNA barcoding can be a useful additional approach for delimiting and determining proturan species.

METHODOLOGY AND PRINCIPAL FINDINGS

The study was performed on 103 proturan specimens, collected primarily in Austria, with additional samples from China and Japan. The animals were examined with two markers, the DNA barcoding region of the mitochondrial COI gene and a fragment of the nuclear 28S rDNA (Divergent Domain 2 and 3). Due to the minuteness of Protura a modified non-destructive DNA-extraction method was used which enables subsequent species determination. Both markers separated the examined proturans into highly congruent well supported clusters. Species determination was performed without knowledge of the results of the molecular analyses. The investigated specimens comprise a total of 16 species belonging to 8 genera. Remarkably, morphological determination in all species exactly mirrors molecular clusters. The investigation revealed unusually huge genetic COI distances among the investigated proturans, both maximal intraspecific distances (0-21.3%), as well as maximal congeneric interspecifical distances (up to 44.7%).

CONCLUSIONS

The study clearly demonstrates that the tricky morphological taxonomy in Protura has a solid biological background and that accurate species delimitation is possible using both markers, COI and 28S rDNA. The fact that both molecular and morphological analyses can be performed on the same individual will be of great importance for the description of new species and offers a valuable new tool for biological and ecological studies, in which proturans have generally remained undetermined at species level.

摘要

背景

原尾目是一类微小的、主要无翅的六足动物,生活在土壤环境中。目前已知约800个有效物种。诊断特征非常不明显,难以识别。因此,分类工作构成了一项特殊挑战,需要特殊技能和经验。本试点项目的目的是研究DNA条形码是否可以作为一种有用的辅助方法来界定和确定原尾目物种。

方法和主要发现

该研究对103个原尾目标本进行了分析,这些标本主要采集于奥地利,另有来自中国和日本的样本。使用两个标记对这些动物进行检测,即线粒体COI基因的DNA条形码区域和核28S rDNA的一个片段(分歧域2和3)。由于原尾目动物体型微小,采用了一种改良的非破坏性DNA提取方法,以便后续进行物种鉴定。两个标记都将所检测的原尾目动物分成了高度一致且支持度良好的聚类。物种鉴定是在不知道分子分析结果的情况下进行的。所研究的标本共有16个物种,分属于8个属。值得注意的是,所有物种的形态学鉴定与分子聚类完全一致。调查发现,在所研究的原尾目动物中,遗传COI距离异常大,最大种内距离(0 - 21.3%)以及最大属内种间距离(高达44.7%)均如此。

结论

该研究清楚地表明,原尾目棘手的形态分类学有坚实的生物学背景,并且使用COI和28S rDNA这两个标记都可以进行准确的物种界定。分子分析和形态分析都可以在同一个体上进行,这一事实对于新物种的描述将非常重要,并为生物学和生态学研究提供了一个有价值的新工具,在这些研究中,原尾目动物在物种水平上通常仍未得到确定。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2940/3946556/1ef3f5cfc2a3/pone.0090653.g001.jpg

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