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在与双环肽拮抗剂形成复合物之前和之后用于表征Grb7 SH2结构域的晶体的制备。

Preparation of crystals for characterizing the Grb7 SH2 domain before and after complex formation with a bicyclic peptide antagonist.

作者信息

Ambaye Nigus D, Gunzburg Menachem J, Traore Daouda A K, Del Borgo Mark P, Perlmutter Patrick, Wilce Matthew C J, Wilce Jacqueline A

机构信息

Department of Biochemistry and Molecular Biology, Monash University, VIC 3800, Australia.

School of Chemistry, Monash University, VIC 3800, Australia.

出版信息

Acta Crystallogr F Struct Biol Commun. 2014 Feb;70(Pt 2):182-6. doi: 10.1107/S2053230X13033414. Epub 2014 Jan 21.

DOI:10.1107/S2053230X13033414
PMID:24637751
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3936443/
Abstract

Human growth factor receptor-bound protein 7 (Grb7) is an adapter protein involved in cell growth, migration and proliferation. It is now recognized that Grb7 is an emerging therapeutic target in specific cancer subtypes. Recently, the discovery of a bicyclic peptide inhibitor that targets the Grb7 SH2 domain, named G7-B1, was reported. In an attempt to probe the foundation of its interaction with Grb7, the crystallization and preliminary data collection of both the apo and G7-B1-bound forms of the Grb7 SH2 domain are reported here. Diffraction-quality crystals were obtained using the hanging-drop vapour-diffusion method. After several rounds of microseeding, crystals of the apo Grb7 SH2 domain were obtained that diffracted to 1.8 Å resolution, while those of the G7-B1-Grb7 SH2 domain complex diffracted to 2.2 Å resolution. The apo Grb7 SH2 domain crystallized in the trigonal space group P63, whereas the G7-B1-Grb7 SH2 domain complex crystallized in the monoclinic space group P21. The experimental aspects of crystallization, crystal optimization and data collection and the preliminary data are reported.

摘要

人生长因子受体结合蛋白7(Grb7)是一种参与细胞生长、迁移和增殖的衔接蛋白。现在人们认识到,Grb7是特定癌症亚型中一个新出现的治疗靶点。最近,有报道称发现了一种靶向Grb7 SH2结构域的双环肽抑制剂,名为G7-B1。为了探究其与Grb7相互作用的基础,本文报道了Grb7 SH2结构域的无配体形式和与G7-B1结合形式的结晶及初步数据收集情况。采用悬滴气相扩散法获得了衍射质量良好的晶体。经过几轮微种子接种,获得了无配体Grb7 SH2结构域的晶体,其衍射分辨率达到1.8 Å,而G7-B1-Grb7 SH2结构域复合物的晶体衍射分辨率为2.2 Å。无配体Grb7 SH2结构域在三方晶系空间群P63中结晶,而G7-B1-Grb7 SH2结构域复合物在单斜晶系空间群P21中结晶。本文报道了结晶、晶体优化、数据收集的实验情况以及初步数据。

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本文引用的文献

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Dissecting GRB7-mediated signals for proliferation and migration in HER2 overexpressing breast tumor cells: GTP-ase rules.解析 GRB7 介导的信号通路在 HER2 过表达的乳腺癌肿瘤细胞中的增殖和迁移作用:GTP 酶规则。
Am J Cancer Res. 2013 Apr 3;3(2):173-95. Print 2013.
2
Design and testing of bicyclic inhibitors of Grb7--are two cycles better than one?Grb7双环抑制剂的设计与测试——两个环比一个环更好吗?
Biopolymers. 2013 Sep;100(5):543-9. doi: 10.1002/bip.22237.
3
Interaction of the non-phosphorylated peptide G7-18NATE with Grb7-SH2 domain requires phosphate for enhanced affinity and specificity.非磷酸化肽 G7-18NATE 与 Grb7-SH2 结构域的相互作用需要磷酸基团来增强亲和力和特异性。
J Mol Recognit. 2012 Jan;25(1):57-67. doi: 10.1002/jmr.2148.
4
GRB7 is required for triple-negative breast cancer cell invasion and survival.GRB7 对于三阴性乳腺癌细胞的侵袭和存活是必需的。
Breast Cancer Res Treat. 2012 Jun;133(2):607-15. doi: 10.1007/s10549-011-1822-6. Epub 2011 Oct 18.
5
Structural basis of binding by cyclic nonphosphorylated peptide antagonists of Grb7 implicated in breast cancer progression.环状非磷酸化肽拮抗剂与 Grb7 结合的结构基础,Grb7 与乳腺癌的进展有关。
J Mol Biol. 2011 Sep 23;412(3):397-411. doi: 10.1016/j.jmb.2011.07.030. Epub 2011 Jul 23.
6
Benzopyrazine derivatives: A novel class of growth factor receptor bound protein 7 antagonists.苯并吡嗪衍生物:一种新型的生长因子受体结合蛋白 7 拮抗剂。
Bioorg Med Chem. 2011 Jan 1;19(1):693-701. doi: 10.1016/j.bmc.2010.10.030. Epub 2010 Oct 19.
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