Suppr超能文献

富含脯氨酸的C末端序列同时拓宽了最佳温度和pH范围,并提高了糖基水解酶家族10瘤胃木聚糖酶的催化效率。

A C-terminal proline-rich sequence simultaneously broadens the optimal temperature and pH ranges and improves the catalytic efficiency of glycosyl hydrolase family 10 ruminal xylanases.

作者信息

Li Zhongyuan, Xue Xianli, Zhao Heng, Yang Peilong, Luo Huiying, Zhao Junqi, Huang Huoqing, Yao Bin

机构信息

Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, Beijing, People's Republic of China.

出版信息

Appl Environ Microbiol. 2014 Jun;80(11):3426-32. doi: 10.1128/AEM.00016-14. Epub 2014 Mar 21.

Abstract

Efficient degradation of plant polysaccharides in rumen requires xylanolytic enzymes with a high catalytic capacity. In this study, a full-length xylanase gene (xynA) was retrieved from the sheep rumen. The deduced XynA sequence contains a putative signal peptide, a catalytic motif of glycoside hydrolase family 10 (GH10), and an extra C-terminal proline-rich sequence without a homolog. To determine its function, both mature XynA and its C terminus-truncated mutant, XynA-Tr, were expressed in Escherichia coli. The C-terminal oligopeptide had significant effects on the function and structure of XynA. Compared with XynA-Tr, XynA exhibited improved specific activity (12-fold) and catalytic efficiency (14-fold), a higher temperature optimum (50°C versus 45°C), and broader ranges of temperature and pH optima (pH 5.0 to 7.5 and 40 to 60°C versus pH 5.5 to 6.5 and 40 to 50°C). Moreover, XynA released more xylose than XynA-Tr when using beech wood xylan and wheat arabinoxylan as the substrate. The underlying mechanisms responsible for these changes were analyzed by substrate binding assay, circular dichroism (CD) spectroscopy, isothermal titration calorimetry (ITC), and xylooligosaccharide hydrolysis. XynA had no ability to bind to any of the tested soluble and insoluble polysaccharides. However, it contained more α helices and had a greater affinity and catalytic efficiency toward xylooligosaccharides, which benefited complete substrate degradation. Similar results were obtained when the C-terminal sequence was fused to another GH10 xylanase from sheep rumen. This study reveals an engineering strategy to improve the catalytic performance of enzymes.

摘要

瘤胃中植物多糖的高效降解需要具有高催化能力的木聚糖酶。在本研究中,从绵羊瘤胃中获得了一个全长木聚糖酶基因(xynA)。推导的XynA序列包含一个假定的信号肽、糖苷水解酶家族10(GH10)的催化基序以及一个无同源物的额外C端富含脯氨酸序列。为了确定其功能,成熟的XynA及其C端截短突变体XynA-Tr均在大肠杆菌中表达。C端寡肽对XynA的功能和结构有显著影响。与XynA-Tr相比,XynA表现出更高的比活性(12倍)和催化效率(14倍)、更高的最适温度(50°C对45°C)以及更宽的最适温度和pH范围(pH 5.0至7.5和40至60°C对pH 5.5至6.5和40至50°C)。此外,以山毛榉木聚糖和小麦阿拉伯木聚糖为底物时,XynA释放的木糖比XynA-Tr更多。通过底物结合测定、圆二色性(CD)光谱、等温滴定量热法(ITC)和木寡糖水解分析了导致这些变化的潜在机制。XynA没有能力与任何测试的可溶性和不溶性多糖结合。然而,它含有更多的α螺旋,对木寡糖具有更高的亲和力和催化效率,这有利于底物的完全降解。当将C端序列与来自绵羊瘤胃的另一种GH10木聚糖酶融合时,也获得了类似的结果。本研究揭示了一种提高酶催化性能的工程策略。

相似文献

3
Fusion of a proline-rich oligopeptide to the C-terminus of a ruminal xylanase improves catalytic efficiency.
Bioengineered. 2022 Apr;13(4):10482-10492. doi: 10.1080/21655979.2022.2061290.
5
Cloning, expression and characterization of glycoside hydrolase family 11 endoxylanase from Bacillus pumilus ARA.
Biotechnol Lett. 2011 Jul;33(7):1407-16. doi: 10.1007/s10529-011-0568-x. Epub 2011 Mar 3.
6
Effectiveness of ruminal xylanase with an extra proline-rich C-terminus on lignocellulosic biomass degradation.
Bioresour Technol. 2023 Mar;372:128695. doi: 10.1016/j.biortech.2023.128695. Epub 2023 Jan 30.
8
Distinct actions by Paenibacillus sp. strain E18 α-L-arabinofuranosidases and xylanase in xylan degradation.
Appl Environ Microbiol. 2013 Mar;79(6):1990-5. doi: 10.1128/AEM.03276-12. Epub 2013 Jan 18.
10
Molecular cloning and characterization of a bifunctional xylanolytic enzyme from Neocallimastix patriciarum.
Appl Microbiol Biotechnol. 2010 Feb;85(5):1451-62. doi: 10.1007/s00253-009-2175-5. Epub 2009 Aug 19.

引用本文的文献

2
Duplication and neofunctionalization of a horizontally transferred xyloglucanase as a facet of the Red Queen coevolutionary dynamic.
Proc Natl Acad Sci U S A. 2024 Jun 11;121(24):e2218927121. doi: 10.1073/pnas.2218927121. Epub 2024 Jun 3.
5
Fusion of a proline-rich oligopeptide to the C-terminus of a ruminal xylanase improves catalytic efficiency.
Bioengineered. 2022 Apr;13(4):10482-10492. doi: 10.1080/21655979.2022.2061290.
7
Expression, purification, and characterization of the recombinant exo-1,3-β-glucanase (Exo1) of the pathogenic oomycete .
Heliyon. 2020 Jun 19;6(6):e04237. doi: 10.1016/j.heliyon.2020.e04237. eCollection 2020 Jun.

本文引用的文献

3
Non-structured amino-acid impact on GH11 differs from GH10 xylanase.
PLoS One. 2012;7(9):e45762. doi: 10.1371/journal.pone.0045762. Epub 2012 Sep 21.
4
Two neutral thermostable cellulases from Phialophora sp. G5 act synergistically in the hydrolysis of filter paper.
Bioresour Technol. 2012 Oct;121:404-10. doi: 10.1016/j.biortech.2012.07.027. Epub 2012 Jul 20.
5
Molecular approaches for ameliorating microbial xylanases.
Bioresour Technol. 2012 Aug;117:360-7. doi: 10.1016/j.biortech.2012.04.034. Epub 2012 Apr 21.
6
Characterization of a bifunctional xylanase/endoglucanase from yak rumen microorganisms.
Appl Microbiol Biotechnol. 2011 Jun;90(6):1933-42. doi: 10.1007/s00253-011-3182-x. Epub 2011 Apr 1.
8
A novel bifunctional endo-/exo-type cellulase from an anaerobic ruminal bacterium.
Appl Microbiol Biotechnol. 2011 Mar;89(5):1453-62. doi: 10.1007/s00253-010-2949-9. Epub 2010 Nov 3.
10
Direct and efficient cloning of full-length genes from environmental DNA by RT-qPCR and modified TAIL-PCR.
Appl Microbiol Biotechnol. 2010 Jul;87(3):1141-9. doi: 10.1007/s00253-010-2613-4. Epub 2010 Apr 27.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验