Department of Biological Sciences, Smith College, Northampton, Massachusetts, 01063, USA.
Department of Biological Sciences, Smith College, Northampton, Massachusetts, 01063, USA; Graduate Program in Organismic and Evolutionary Biology, University of Massachusetts, Amherst, Massachusetts, 01003, USA.
Protist. 2014 Mar;165(2):196-207. doi: 10.1016/j.protis.2014.02.001. Epub 2014 Feb 17.
Testate (shelled) amoebae are abundant and diverse in Sphagnum-rich areas of bogs and fens. Test morphology is standardly used to identify morphospecies as tests have varying shapes and compositions (e.g. siliceous, proteinaceous, agglutinated, or even calcareous). The recent application of molecular tools has revealed a greater complexity than morphology suggests, including multiple cryptic species. Here, we assess the biodiversity and relationships among eight morphospecies: Hyalosphenia elegans, Hyalosphenia papilio, Nebela carinata, Nebela flabellulum, Nebela militaris, Nebela tincta, Nebela tubulosa, and Quadrulella symmetrica using small subunit ribosomal DNA (SSU-rDNA). An SSU-rDNA phylogeny including 20 specimens from GenBank and 63 from this study reveals diversity within and among morphospecies and low resolution among some Nebela spp. Previous SSU-rDNA work on a limited sample of these species showed non-monophyly in the genus Hyalosphenia. Our analyses confirm this pattern and further suggest that other Nebela genera and morphospecies are not monophyletic. Moreover, inclusion of up to 24 specimens per species indicates non-monophyly of the morphospecies Hyalosphenia papilio and Hyalosphenia elegans. Our results suggest the morphological plasticity of testate amoebae across evolutionary time scales and that a combination of morphology and molecular analyses is needed to understand the biodiversity of these taxa.
富含泥炭藓的沼泽和湿地地区富含多样的有壳变形虫。通常使用测试形态来识别形态种,因为测试具有不同的形状和组成(例如硅质、蛋白质、胶结或甚至钙质)。最近应用分子工具揭示了比形态学所暗示的更大的复杂性,包括多个隐种。在这里,我们使用小亚基核糖体 DNA(SSU-rDNA)评估了八个形态种的生物多样性和关系:Hyalosphenia elegans、Hyalosphenia papilio、Nebela carinata、Nebela flabellulum、Nebela militaris、Nebela tincta、Nebela tubulosa 和 Quadrulella symmetrica。包括来自 GenBank 的 20 个标本和本研究中的 63 个标本的 SSU-rDNA 系统发育树揭示了形态种内和种间的多样性以及一些 Nebela spp. 的分辨率较低。以前对这些物种的有限样本进行的 SSU-rDNA 研究表明,Hyalosphenia 属中的非单系性。我们的分析证实了这种模式,并进一步表明其他 Nebela 属和形态种不是单系的。此外,每个物种最多包含 24 个标本表明形态种 Hyalosphenia papilio 和 Hyalosphenia elegans 的非单系性。我们的结果表明,有壳变形虫在进化时间尺度上的形态可塑性,并且需要结合形态学和分子分析来理解这些类群的生物多样性。