• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

新英格兰沼泽和湿地中壳质变形目有壳变形虫(肉足虫门:胶甲目)的隐存多样性。

Cryptic diversity within morphospecies of testate amoebae (Amoebozoa: Arcellinida) in New England bogs and fens.

机构信息

Department of Biological Sciences, Smith College, Northampton, Massachusetts, 01063, USA.

Department of Biological Sciences, Smith College, Northampton, Massachusetts, 01063, USA; Graduate Program in Organismic and Evolutionary Biology, University of Massachusetts, Amherst, Massachusetts, 01003, USA.

出版信息

Protist. 2014 Mar;165(2):196-207. doi: 10.1016/j.protis.2014.02.001. Epub 2014 Feb 17.

DOI:10.1016/j.protis.2014.02.001
PMID:24657945
Abstract

Testate (shelled) amoebae are abundant and diverse in Sphagnum-rich areas of bogs and fens. Test morphology is standardly used to identify morphospecies as tests have varying shapes and compositions (e.g. siliceous, proteinaceous, agglutinated, or even calcareous). The recent application of molecular tools has revealed a greater complexity than morphology suggests, including multiple cryptic species. Here, we assess the biodiversity and relationships among eight morphospecies: Hyalosphenia elegans, Hyalosphenia papilio, Nebela carinata, Nebela flabellulum, Nebela militaris, Nebela tincta, Nebela tubulosa, and Quadrulella symmetrica using small subunit ribosomal DNA (SSU-rDNA). An SSU-rDNA phylogeny including 20 specimens from GenBank and 63 from this study reveals diversity within and among morphospecies and low resolution among some Nebela spp. Previous SSU-rDNA work on a limited sample of these species showed non-monophyly in the genus Hyalosphenia. Our analyses confirm this pattern and further suggest that other Nebela genera and morphospecies are not monophyletic. Moreover, inclusion of up to 24 specimens per species indicates non-monophyly of the morphospecies Hyalosphenia papilio and Hyalosphenia elegans. Our results suggest the morphological plasticity of testate amoebae across evolutionary time scales and that a combination of morphology and molecular analyses is needed to understand the biodiversity of these taxa.

摘要

富含泥炭藓的沼泽和湿地地区富含多样的有壳变形虫。通常使用测试形态来识别形态种,因为测试具有不同的形状和组成(例如硅质、蛋白质、胶结或甚至钙质)。最近应用分子工具揭示了比形态学所暗示的更大的复杂性,包括多个隐种。在这里,我们使用小亚基核糖体 DNA(SSU-rDNA)评估了八个形态种的生物多样性和关系:Hyalosphenia elegans、Hyalosphenia papilio、Nebela carinata、Nebela flabellulum、Nebela militaris、Nebela tincta、Nebela tubulosa 和 Quadrulella symmetrica。包括来自 GenBank 的 20 个标本和本研究中的 63 个标本的 SSU-rDNA 系统发育树揭示了形态种内和种间的多样性以及一些 Nebela spp. 的分辨率较低。以前对这些物种的有限样本进行的 SSU-rDNA 研究表明,Hyalosphenia 属中的非单系性。我们的分析证实了这种模式,并进一步表明其他 Nebela 属和形态种不是单系的。此外,每个物种最多包含 24 个标本表明形态种 Hyalosphenia papilio 和 Hyalosphenia elegans 的非单系性。我们的结果表明,有壳变形虫在进化时间尺度上的形态可塑性,并且需要结合形态学和分子分析来理解这些类群的生物多样性。

相似文献

1
Cryptic diversity within morphospecies of testate amoebae (Amoebozoa: Arcellinida) in New England bogs and fens.新英格兰沼泽和湿地中壳质变形目有壳变形虫(肉足虫门:胶甲目)的隐存多样性。
Protist. 2014 Mar;165(2):196-207. doi: 10.1016/j.protis.2014.02.001. Epub 2014 Feb 17.
2
Are microbes fundamentally different than macroorganisms? Convergence and a possible case for neutral phenotypic evolution in testate amoeba (Amoebozoa: Arcellinida).微生物与宏观生物在本质上有区别吗?在有壳变形虫(肉足虫亚门:胶甲目)中,趋同进化和中性表型进化的可能案例
R Soc Open Sci. 2015 Dec 16;2(12):150414. doi: 10.1098/rsos.150414. eCollection 2015 Dec.
3
COI barcoding of Nebelid testate amoebae (Amoebozoa: Arcellinida): extensive cryptic diversity and redefinition of the Hyalospheniidae Schultze.Nebelid 有壳变形虫(肉足虫亚门:胶结壳目)的 COI 条形码:广泛的隐存多样性和 Hyalospheniidae Schultze 的重新定义。
Protist. 2012 May;163(3):415-34. doi: 10.1016/j.protis.2011.10.003. Epub 2011 Nov 30.
4
Ribosomal RNA genes challenge the monophyly of the Hyalospheniidae (Amoebozoa: Arcellinida).核糖体RNA基因对透明胶网黏菌科(变形虫门:表壳目)的单系性提出了挑战。
Protist. 2008 Apr;159(2):165-76. doi: 10.1016/j.protis.2007.09.003. Epub 2007 Nov 26.
5
Nebela jiuhuensis nov. sp. (Amoebozoa; Arcellinida; Hyalospheniidae): A New Member of the Nebela saccifera - equicalceus - ansata Group Described from Sphagnum Peatlands in South-Central China.九华山内变形虫新种(变形虫门;表壳目;透明表壳科):一种来自中国中南部泥炭藓泥炭地的新成员,属于囊形内变形虫-等钙内变形虫-环瓣内变形虫类群
J Eukaryot Microbiol. 2016 Sep;63(5):558-66. doi: 10.1111/jeu.12300. Epub 2016 Mar 18.
6
Morphological and molecular diversification of Asian endemic Difflugia tuberspinifera (Amoebozoa, Arcellinida): a case of fast morphological evolution in protists?亚洲特有种棘刺匣壳虫(变形虫门,表壳虫目)的形态学与分子多样性:原生生物快速形态演化的一个实例?
Protist. 2015 Feb;166(1):122-30. doi: 10.1016/j.protis.2014.11.004. Epub 2014 Dec 5.
7
Using DNA-barcoding for sorting out protist species complexes: a case study of the Nebela tincta-collaris-bohemica group (Amoebozoa; Arcellinida, Hyalospheniidae).利用 DNA 条码对原生动物种复合体进行分类:以 Nebela tincta-collaris-bohemica 组(肉足虫门;胶球藻目,胶球藻科)为例。
Eur J Protistol. 2013 May;49(2):222-37. doi: 10.1016/j.ejop.2012.08.006. Epub 2012 Oct 23.
8
En garde! Redefinition of Nebela militaris (Arcellinida, Hyalospheniidae) and erection of Alabasta gen. nov.注意!对军事内氏变形虫(网足虫纲,透明球壳科)的重新定义及新属阿拉巴斯塔属的建立
Eur J Protistol. 2018 Oct;66:156-165. doi: 10.1016/j.ejop.2018.08.005. Epub 2018 Aug 23.
9
Eight species in the Nebela collaris complex: Nebela gimlii (Arcellinida, Hyalospheniidae), a new species described from a Swiss raised bog.颈状星云复合体中的八个物种:吉氏星云(裸口目,透明表壳科),一种从瑞士高位沼泽中描述的新物种。
Eur J Protistol. 2015 Feb;51(1):79-85. doi: 10.1016/j.ejop.2014.11.004. Epub 2014 Nov 24.
10
Barcoding amoebae: comparison of SSU, ITS and COI genes as tools for molecular identification of naked lobose amoebae.对裸质变形虫进行 barcoding:SSU、ITS 和 COI 基因作为分子鉴定裸质变形虫工具的比较。
Protist. 2010 Jan;161(1):102-15. doi: 10.1016/j.protis.2009.07.003. Epub 2009 Oct 12.

引用本文的文献

1
Testate amoebae (Arcellinida, Amoebozoa) community diversity in New England bogs and fens assessed through lineage-specific amplicon sequencing.通过特定谱系扩增子测序评估新英格兰沼泽和湿地中的有壳变形虫(Arcellinida,Amoebozoa)群落多样性。
Eur J Protistol. 2024 Feb;92:126049. doi: 10.1016/j.ejop.2023.126049. Epub 2023 Dec 15.
2
Single-cell transcriptomics supports presence of cryptic species and reveals low levels of population genetic diversity in two testate amoebae morphospecies with large population sizes.单细胞转录组学支持隐种的存在,并揭示了两个具有较大种群规模的有壳变形虫形态种的种群遗传多样性水平较低。
Evolution. 2023 Nov 2;77(11):2472-2483. doi: 10.1093/evolut/qpad158.
3
Epigenetics as Driver of Adaptation and Diversification in Microbial Eukaryotes.
表观遗传学作为微生物真核生物适应与多样化的驱动因素
Front Genet. 2021 Mar 16;12:642220. doi: 10.3389/fgene.2021.642220. eCollection 2021.
4
Ecological and evolutionary patterns in the enigmatic protist genus Percolomonas (Heterolobosea; Discoba) from diverse habitats.从不同生境中探讨神秘原生动物属(异毛目;盘蜷目)Percolomonas 的生态和进化模式。
PLoS One. 2019 Aug 29;14(8):e0216188. doi: 10.1371/journal.pone.0216188. eCollection 2019.
5
Are microbes fundamentally different than macroorganisms? Convergence and a possible case for neutral phenotypic evolution in testate amoeba (Amoebozoa: Arcellinida).微生物与宏观生物在本质上有区别吗?在有壳变形虫(肉足虫亚门:胶甲目)中,趋同进化和中性表型进化的可能案例
R Soc Open Sci. 2015 Dec 16;2(12):150414. doi: 10.1098/rsos.150414. eCollection 2015 Dec.
6
Moss stable isotopes (carbon-13, oxygen-18) and testate amoebae reflect environmental inputs and microclimate along a latitudinal gradient on the Antarctic Peninsula.苔藓稳定同位素(碳-13、氧-18)和有壳变形虫反映了南极半岛沿纬度梯度的环境输入和小气候。
Oecologia. 2016 Jul;181(3):931-45. doi: 10.1007/s00442-016-3608-3. Epub 2016 Mar 22.
7
The Phanerozoic diversification of silica-cycling testate amoebae and its possible links to changes in terrestrial ecosystems.显生宙硅循环有壳变形虫的多样化及其与陆地生态系统变化的可能联系。
PeerJ. 2015 Sep 8;3:e1234. doi: 10.7717/peerj.1234. eCollection 2015.
8
How discordant morphological and molecular evolution among microorganisms can revise our notions of biodiversity on Earth.微生物之间形态和分子进化的不一致如何改变我们对地球上生物多样性的认知。
Bioessays. 2014 Oct;36(10):950-9. doi: 10.1002/bies.201400056. Epub 2014 Aug 25.