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一个主要由“海龙目”(硬骨鱼纲)组成的新鲈形目鱼类分支的线粒体基因组界定

Mitogenomic circumscription of a novel percomorph fish clade mainly comprising "Syngnathoidei" (Teleostei).

作者信息

Song Ha Yeun, Mabuchi Kohji, Satoh Takashi P, Moore Jon A, Yamanoue Yusuke, Miya Masaki, Nishida Mutsumi

机构信息

Atmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8564, Japan.

Atmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8564, Japan.

出版信息

Gene. 2014 Jun 1;542(2):146-55. doi: 10.1016/j.gene.2014.03.040. Epub 2014 Mar 25.

Abstract

Percomorpha, comprising about 60% of modern teleost fishes, has been described as the "(unresolved) bush at the top" of the tree, with its intrarelationships still being ambiguous owing to huge diversity (>15,000 species). Recent molecular phylogenetic studies based on extensive taxon and character sampling, however, have revealed a number of unexpected clades of Percomorpha, and one of which is composed of Syngnathoidei (seahorses, pipefishes, and their relatives) plus several groups distributed across three different orders. To circumscribe the clade more definitely, we sampled several candidate taxa with reference to the previous studies and newly determined whole mitochondrial genome (mitogenome) sequences for 16 percomorph species across syngnathoids, dactylopterids, and their putatively closely-related fishes (Mullidae, Callionymoidei, Malacanthidae). Unambiguously aligned sequences (13,872 bp) from those 16 species plus 78 percomorphs and two outgroups (total 96 species) were subjected to partitioned Bayesian and maximum likelihood analyses. The resulting trees revealed a highly supported clade comprising seven families in Syngnathoidei (Gasterosteiformes), Dactylopteridae (Scorpaeniformes), Mullidae in Percoidei and two families in Callionymoidei (Perciformes). We herein proposed to call this clade "Syngnathiformes" following the latest nuclear DNA studies with some revisions on the included families.

摘要

鲈形亚类约占现代硬骨鱼的60%,被描述为鱼类进化树“顶部(未解决的)灌木丛”,由于其种类极为多样(超过15000种),其内部亲缘关系仍不明确。然而,最近基于广泛的分类群和特征取样的分子系统发育研究揭示了鲈形亚类中一些意想不到的进化枝,其中一个进化枝由海龙目(海马、管口鱼及其近亲)加上分布在三个不同目里的几个类群组成。为了更明确地界定这个进化枝,我们参考之前的研究对几个候选分类群进行了取样,并新测定了16种鲈形亚类物种的完整线粒体基因组(线粒体基因组)序列,这些物种涵盖海龙目、飞角鱼科及其假定的近缘鱼类(羊鱼科、裸鼬鳚亚目、弱棘鱼科)。对这16个物种加上78个鲈形亚类物种和两个外类群(共96个物种)明确比对后的序列(13872 bp)进行了分区贝叶斯分析和最大似然分析。结果得到的系统树显示,一个得到高度支持的进化枝包括海龙目(刺鱼目)的七个科、飞角鱼科(鲉形目)、鲈形亚目鲈总科的羊鱼科以及裸鼬鳚亚目的两个科(鲈形目)。在此,我们根据最新的核DNA研究并对所包含的科做了一些修订,提议将这个进化枝称为“海龙形目”。

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