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Biomed Opt Express. 2012 Nov 1;3(11):2794-808. doi: 10.1364/BOE.3.002794. Epub 2012 Oct 11.
2
Bioluminescence tomography using eigenvectors expansion and iterative solution for the optimized permissible source region.基于特征向量展开和迭代求解的生物发光断层成像优化允许源区域研究
Biomed Opt Express. 2011 Nov 1;2(11):3179-93. doi: 10.1364/BOE.2.003179. Epub 2011 Oct 26.
3
Improved bioluminescence and fluorescence reconstruction algorithms using diffuse optical tomography, normalized data, and optimized selection of the permissible source region.使用扩散光学断层扫描、归一化数据和允许源区域的优化选择改进生物发光和荧光重建算法。
Biomed Opt Express. 2010 Dec 20;2(1):169-84. doi: 10.1364/BOE.2.000169.
4
Algorithms for bioluminescence tomography incorporating anatomical information and reconstruction of tissue optical properties.结合解剖学信息和组织光学特性重建的生物发光断层扫描算法。
Biomed Opt Express. 2010 Aug 5;1(2):512-526. doi: 10.1364/BOE.1.000512.
5
3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images.从二维多幅摄影图像对任意表面上光通量分布进行三维重建。
Opt Express. 2010 Sep 13;18(19):19876-93. doi: 10.1364/OE.18.019876.
6
Truncated total least squares method with a practical truncation parameter choice scheme for bioluminescence tomography inverse problem.具有实用截断参数选择方案的截断总最小二乘法用于生物发光断层成像逆问题
Int J Biomed Imaging. 2010;2010:291874. doi: 10.1155/2010/291874. Epub 2010 May 19.
7
Near infrared optical tomography using NIRFAST: Algorithm for numerical model and image reconstruction.使用NIRFAST的近红外光学断层扫描:数值模型与图像重建算法
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8
Image reconstruction for diffuse optical tomography using sparsity regularization and expectation-maximization algorithm.基于稀疏正则化和期望最大化算法的扩散光学层析成像图像重建
Opt Express. 2007 Oct 17;15(21):13695-708. doi: 10.1364/oe.15.013695.
9
Practical reconstruction method for bioluminescence tomography.生物发光断层成像的实用重建方法。
Opt Express. 2005 Sep 5;13(18):6756-71. doi: 10.1364/opex.13.006756.
10
Three-dimensional bioluminescence tomography with model-based reconstruction.基于模型重建的三维生物发光断层成像。
Opt Express. 2004 Aug 23;12(17):3996-4000. doi: 10.1364/opex.12.003996.

局部自适应漫射光学层析成像算法及其在生物发光层析成像中的应用。

Algorithm for localized adaptive diffuse optical tomography and its application in bioluminescence tomography.

作者信息

Naser Mohamed A, Patterson Michael S, Wong John W

机构信息

Department of Medical Physics and Applied Radiation Sciences, McMaster University, 1260 Main St West, Hamilton, ON, L8S 4L8, Canada.

出版信息

Phys Med Biol. 2014 Apr 21;59(8):2089-109. doi: 10.1088/0031-9155/59/8/2089. Epub 2014 Apr 2.

DOI:10.1088/0031-9155/59/8/2089
PMID:24694875
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4117192/
Abstract

A reconstruction algorithm for diffuse optical tomography based on diffusion theory and finite element method is described. The algorithm reconstructs the optical properties in a permissible domain or region-of-interest to reduce the number of unknowns. The algorithm can be used to reconstruct optical properties for a segmented object (where a CT-scan or MRI is available) or a non-segmented object. For the latter, an adaptive segmentation algorithm merges contiguous regions with similar optical properties thereby reducing the number of unknowns. In calculating the Jacobian matrix the algorithm uses an efficient direct method so the required time is comparable to that needed for a single forward calculation. The reconstructed optical properties using segmented, non-segmented, and adaptively segmented 3D mouse anatomy (MOBY) are used to perform bioluminescence tomography (BLT) for two simulated internal sources. The BLT results suggest that the accuracy of reconstruction of total source power obtained without the segmentation provided by an auxiliary imaging method such as x-ray CT is comparable to that obtained when using perfect segmentation.

摘要

描述了一种基于扩散理论和有限元方法的漫射光学层析成像重建算法。该算法在允许的域或感兴趣区域内重建光学特性,以减少未知数的数量。该算法可用于重建分段物体(有CT扫描或MRI数据)或非分段物体的光学特性。对于后者,一种自适应分割算法将具有相似光学特性的相邻区域合并,从而减少未知数的数量。在计算雅可比矩阵时,该算法使用一种高效的直接方法,因此所需时间与单次正向计算所需时间相当。使用分段、非分段和自适应分段的三维小鼠解剖模型(MOBY)重建的光学特性,用于对两个模拟内部光源进行生物发光层析成像(BLT)。BLT结果表明,在没有诸如X射线CT等辅助成像方法提供的分割的情况下,获得的总源功率重建精度与使用完美分割时相当。