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三种硫脲嘧啶衍生物中的超分子结构:5,6-亚甲基-2-硫代亚烷基-1,2-二氢嘧啶-4(3H)-酮、2-(4-氟苄基硫基)-5,6-亚甲基嘧啶-4(3H)-酮和2-{[2-(4-氟苄基硫基)-5,6-亚甲基嘧啶-4-基]氧基}乙酸甲酯。

Supramolecular structures in three thiouracil derivatives: 5,6-trimethylene-2-sulfanylidene-1,2-dihydropyrimidin-4(3H)-one, 2-(4-fluorobenzylsulfanyl)-5,6-trimethylenepyrimidin-4(3H)-one and methyl 2-{[2-(4-fluorobenzylsulfanyl)-5,6-trimethylenepyrimidin-4-yl]oxy}acetate.

作者信息

Zhou Yu-Jun, Lv Jing, Yu Kai, Ma Jian-Ping, Guo Dian-Shun

机构信息

Department of Chemistry, Shandong Normal University, Jinan 250014, People's Republic of China.

出版信息

Acta Crystallogr C Struct Chem. 2014 Apr;70(Pt 4):416-20. doi: 10.1107/S2053229614006111. Epub 2014 Mar 29.

Abstract

The molecules of the title compounds, C7H8N2OS, (1), C14H13FN2OS, (2), and C17H17FN2O3S, (3), crystallize in the space groups C2/m, C2/c and Ia, respectively. Compounds (1) and (2), an S-alkylated derivative of (1), consist of only one symmetry-independent molecule, while (3), an O-alkylated derivative of (2), contains two independent molecules in the asymmetric unit. The molecules of (1) sit on crystallographic mirror planes. In the supramolecular structure of (1), a combination of N-H···O and N-H···S hydrogen bonds creates a molecular strap with C(6) and R2(2)(8) motifs, which is further stabilized by an S···S contact. In the packing of (2), a one-dimensional molecular column is made up of two kinds of dimers. One dimer, with an R2(2)(18) motif, is formed by a pair of C-H···O soft hydrogen bonds and the other, with an R2(2)(8) motif, is produced via a pair of N-H···O hard hydrogen bonds. In the packing of (3), molecules A and B form two different types of one-dimensional chain by intermolecular C-H···N hydrogen bonds, and by C···N and O···S contacts, respectively. Two such kinds of chain are connected alternately via interchain C-H···O hydrogen bonds, giving a two-dimensional sheet. Finally, a three-dimensional supramolecular structure is formed through weak intersheet C-H···F hydrogen bonds. The study of the molecular and supramolecular structures of thiouracil derivatives is significant in the development of lipoprotein-associated phospholipase A2 inhibitors.

摘要

标题化合物C7H8N2OS(1)、C14H13FN2OS(2)和C17H17FN2O3S(3)的分子分别在空间群C2/m、C2/c和Ia中结晶。化合物(1)及其S-烷基化衍生物(2)仅由一个对称独立分子组成,而(2)的O-烷基化衍生物(3)在不对称单元中包含两个独立分子。(1)的分子位于晶体学镜面平面上。在(1)的超分子结构中,N-H···O和N-H···S氢键的组合形成了具有C(6)和R2(2)(8)基序的分子带,该分子带通过S···S接触进一步稳定。在(2)的堆积中,一维分子柱由两种二聚体组成。一种具有R2(2)(18)基序的二聚体由一对C-H···O软氢键形成,另一种具有R2(2)(8)基序的二聚体通过一对N-H···O硬氢键形成。在(3)的堆积中,分子A和B分别通过分子间C-H···N氢键以及C···N和O···S接触形成两种不同类型的一维链。两种这样的链通过链间C-H···O氢键交替连接,形成二维片层。最后,通过弱的片层间C-H···F氢键形成三维超分子结构。硫脲衍生物的分子和超分子结构研究在脂蛋白相关磷脂酶A2抑制剂的开发中具有重要意义。

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