Tomaszkiewicz Marta, Chalopin Domitille, Schartl Manfred, Galiana Delphine, Volff Jean-Nicolas
Institut de Génomique Fonctionnelle de Lyon, Ecole Normale Supérieure de Lyon, Centre National de la Recherche Scientifique UMR 5242, Université de Lyon I, 46 allée d'Italie, Lyon 69364, Lyon Cedex 07, France.
BMC Genet. 2014 Apr 8;15:44. doi: 10.1186/1471-2156-15-44.
Teleost fish present a high diversity of sex determination systems, with possible frequent evolutionary turnover of sex chromosomes and sex-determining genes. In order to identify genes involved in male sex determination and differentiation in the platyfish Xiphophorus maculatus, bacterial artificial chromosome contigs from the sex-determining region differentiating the Y from the X chromosome have been assembled and analyzed.
A novel three-copy gene called teximY (for testis-expressed in Xiphophorus maculatus on the Y) was identified on the Y but not on the X chromosome. A highly related sequence called texim1, probably at the origin of the Y-linked genes, as well as three more divergent texim genes were detected in (pseudo)autosomal regions of the platyfish genome. Texim genes, for which no functional data are available so far in any organism, encode predicted esterases/lipases with a SGNH hydrolase domain. Texim proteins are related to proteins from very different origins, including proteins encoded by animal CR1 retrotransposons, animal platelet-activating factor acetylhydrolases (PAFah) and bacterial hydrolases. Texim gene distribution is patchy in animals. Texim sequences were detected in several fish species including killifish, medaka, pufferfish, sea bass, cod and gar, but not in zebrafish. Texim-like genes are also present in Oikopleura (urochordate), Amphioxus (cephalochordate) and sea urchin (echinoderm) but absent from mammals and other tetrapods. Interestingly, texim genes are associated with a Helitron transposon in different fish species but not in urochordates, cephalochordates and echinoderms, suggesting capture and mobilization of an ancestral texim gene in the bony fish lineage. RT-qPCR analyses showed that Y-linked teximY genes are preferentially expressed in testis, with expression at late stages of spermatogenesis (late spermatids and spermatozeugmata).
These observations suggest either that TeximY proteins play a role in Helitron transposition in the male germ line in fish, or that texim genes are spermatogenesis genes mobilized and spread by transposable elements in fish genomes.
硬骨鱼呈现出高度多样的性别决定系统,性染色体和性别决定基因可能频繁发生进化更替。为了鉴定参与剑尾鱼(Xiphophorus maculatus)雄性性别决定和分化的基因,已对区分Y染色体和X染色体的性别决定区域的细菌人工染色体重叠群进行了组装和分析。
在Y染色体上鉴定出一个名为teximY(剑尾鱼Y染色体上睾丸表达)的新的三拷贝基因,而在X染色体上未发现。在剑尾鱼基因组的(假)常染色体区域检测到一个高度相关的序列texim1,可能是Y连锁基因的起源,以及另外三个差异较大的texim基因。到目前为止,在任何生物体中都没有关于Texim基因功能数据,它们编码具有SGNH水解酶结构域的预测酯酶/脂肪酶。Texim蛋白与来源非常不同的蛋白质相关,包括动物CR1反转录转座子编码的蛋白质、动物血小板活化因子乙酰水解酶(PAFah)和细菌水解酶。Texim基因在动物中的分布是不连续的。在包括鳉鱼、青鳉、河豚、海鲈、鳕鱼和雀鳝在内的几种鱼类中检测到了Texim序列,但在斑马鱼中未检测到。类似Texim的基因也存在于尾海鞘(尾索动物)、文昌鱼(头索动物)和海胆(棘皮动物)中,但在哺乳动物和其他四足动物中不存在。有趣的是,在不同的鱼类中,texim基因与一个Helitron转座子相关,但在尾索动物、头索动物和棘皮动物中则不然,这表明在硬骨鱼谱系中一个祖先texim基因被捕获并移动。RT-qPCR分析表明,Y连锁的teximY基因在睾丸中优先表达,在精子发生后期(晚期精子细胞和精子束)表达。
这些观察结果表明,要么TeximY蛋白在鱼类雄性生殖系的Helitron转座中起作用,要么texim基因是鱼类基因组中由转座元件移动和传播的精子发生基因。