Department of Cell, Developmental and Integrative Biology, University of Alabama at Birmingham, 1918 University Boulevard, MCLM 668, Birmingham, AL, 35233-2008, USA,
Cell Mol Life Sci. 2014 Sep;71(18):3419-38. doi: 10.1007/s00018-014-1602-7. Epub 2014 Apr 13.
Eukaryotic cells require selective sorting and transport of cargo between intracellular compartments. This is accomplished at least in part by vesicles that bud from a donor compartment, sequestering a subset of resident protein "cargos" destined for transport to an acceptor compartment. A key step in vesicle formation and targeting is the recruitment of specific proteins that form a coat on the outside of the vesicle in a process requiring the activation of regulatory GTPases of the ARF family. Like all such GTPases, ARFs cycle between inactive, GDP-bound, and membrane-associated active, GTP-bound, conformations. And like most regulatory GTPases the activating step is slow and thought to be rate limiting in cells, requiring the use of ARF guanine nucleotide exchange factor (GEFs). ARF GEFs are characterized by the presence of a conserved, catalytic Sec7 domain, though they also contain motifs or additional domains that confer specificity to localization and regulation of activity. These domains have been used to define and classify five different sub-families of ARF GEFs. One of these, the BIG/GBF1 family, includes three proteins that are each key regulators of the secretory pathway. GEF activity initiates the coating of nascent vesicles via the localized generation of activated ARFs and thus these GEFs are the upstream regulators that define the site and timing of vesicle production. Paradoxically, while we have detailed molecular knowledge of how GEFs activate ARFs, we know very little about how GEFs are recruited and/or activated at the right time and place to initiate transport. This review summarizes the current knowledge of GEF regulation and explores the still uncertain mechanisms that position GEFs at "budding ready" membrane sites to generate highly localized activated ARFs.
真核细胞需要在细胞内隔室之间有选择地分拣和运输货物。这至少部分是通过从小泡芽生的小泡来完成的,小泡隔离了一组驻留蛋白“货物”,这些货物注定要运输到接受隔室。小泡形成和靶向的关键步骤是募集特定的蛋白质,这些蛋白质在一个需要 ARF 家族调节 GTPase 激活的过程中在小泡的外部形成一层外壳。与所有此类 GTPase 一样,ARF 循环于非活性、GDP 结合和膜相关的活性、GTP 结合构象之间。与大多数调节 GTPase 一样,激活步骤较慢,被认为在细胞中是限速的,需要使用 ARF 鸟嘌呤核苷酸交换因子(GEF)。ARF GEF 的特征是存在保守的、催化 Sec7 结构域,尽管它们还包含基序或额外的结构域,这些结构域赋予其定位和活性调节的特异性。这些结构域已被用于定义和分类五个不同的 ARF GEF 亚家族。其中之一是 BIG/GBF1 家族,包括三种蛋白质,它们都是分泌途径的关键调节剂。GEF 活性通过局部产生激活的 ARF 启动新生小泡的涂层,因此这些 GEF 是定义小泡产生的部位和时间的上游调节剂。矛盾的是,虽然我们有关于 GEF 如何激活 ARF 的详细分子知识,但我们对 GEF 如何在正确的时间和地点被募集和/或激活以启动运输知之甚少。这篇综述总结了 GEF 调节的当前知识,并探讨了仍然不确定的机制,这些机制将 GEF 定位在“出芽准备”的膜部位,以产生高度本地化的激活的 ARF。