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嗜热嗜酸古菌嗜热栖热放线菌4-羟基苯丙酮酸双加氧酶的结构与功能表征

Structural and functional characterization of 4-hydroxyphenylpyruvate dioxygenase from the thermoacidophilic archaeon Picrophilus torridus.

作者信息

Frick Eduard, Spatzal Thomas, Gerhardt Stefan, Krämer Andreas, Einsle Oliver, Hüttel Wolfgang

机构信息

Institut für Pharmazeutische Wissenschaften, Albert-Ludwigs-Universität Freiburg, 79104, Freiburg, Germany,

出版信息

Extremophiles. 2014 Jul;18(4):641-51. doi: 10.1007/s00792-014-0645-x. Epub 2014 May 3.

Abstract

4-Hydroxyphenylpyruvate dioxygenase (Hpd, EC 1.13.11.27) catalyzes the conversion of 4-hydroxyphenylpyruvate into homogentisate in the second step of oxidative tyrosine catabolism. This pathway is known from bacteria and eukaryotes, but so far no archaeal Hpd has been described. Here, we report the biochemical characterization of an Hpd from the extremophilic archaeon Picrophilus torridus (Pt_Hpd), together with its three-dimensional structure at a resolution of 2.6 Å. Two pH optima were observed at 50 °C: pH 4.0 (close to native conditions) and pH 7.0. The enzyme showed only moderate thermostability and was inactivated with a half-life of ~1.5 h even under optimal reaction conditions. At the ideal physiological growth conditions of P. torridus, Pt_Hpd was inactive after 1 h, showing that the enzyme is protected in vivo from denaturation and/or is only partially adapted to the harsh environmental conditions in the cytosol of P. torridus. The influence of different additives on the activity was investigated. Pt_Hpd exhibited a turnover number k(cat) of 9.9 ± 0.6 s(-1) and a substrate binding affinity K(m) of 142 ± 23 µM. In addition, substrate inhibition with a binding affinity K(i) of 1.9 ± 0.3 mM was observed. Pt_Hpd is compared with isoenzymes from other species and the putative bacterial origin of the gene is discussed.

摘要

4-羟基苯丙酮酸双加氧酶(Hpd,EC 1.13.11.27)在氧化型酪氨酸分解代谢的第二步中催化4-羟基苯丙酮酸转化为尿黑酸。细菌和真核生物中都存在这条代谢途径,但迄今为止尚未有古菌Hpd的相关报道。在此,我们报告了嗜热嗜酸古菌嗜热栖热菌(Picrophilus torridus)的Hpd(Pt_Hpd)的生化特性及其分辨率为2.6 Å的三维结构。在50 °C观察到两个最适pH值:pH 4.0(接近天然条件)和pH 7.0。该酶仅表现出适度的热稳定性,即使在最佳反应条件下,其失活半衰期约为1.5小时。在嗜热栖热菌的理想生理生长条件下,Pt_Hpd在1小时后即失活,这表明该酶在体内受到保护以免于变性,和/或仅部分适应嗜热栖热菌胞质溶胶中的恶劣环境条件。我们研究了不同添加剂对其活性的影响。Pt_Hpd的催化常数k(cat)为9.9 ± 0.6 s(-1),底物结合亲和力K(m)为142 ± 23 µM。此外,还观察到底物抑制现象,其结合亲和力K(i)为1.9 ± 0.3 mM。我们将Pt_Hpd与其他物种的同工酶进行了比较,并讨论了该基因可能的细菌起源。

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