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一种用于嗜酸硫杆菌的多功能高效无标记基因敲除系统:在鉴定与铜耐受相关的多铜氧化酶基因中的应用。

A versatile and efficient markerless gene disruption system for Acidithiobacillus thiooxidans: application for characterizing a copper tolerance related multicopper oxidase gene.

机构信息

State Key Laboratory of Microbial Technology, Shandong University, Jinan, 250100, China.

出版信息

Environ Microbiol. 2014 Nov;16(11):3499-514. doi: 10.1111/1462-2920.12494. Epub 2014 May 28.

Abstract

The acidophilic bioleaching bacteria can usually survive in high concentrations of copper ions because of their special living environment. However, little is known about the copper homeostatic mechanisms of Acidithiobacillus thiooxidans, an important member of bioleaching bacteria. Here, a putative multicopper oxidase gene (cueO) was detected from the draft genome of A. thiooxidans ATCC 19377. The transcriptional level of cueO in response to 10 mM CuSO₄was upregulated 25.01 ± 2.59 folds. The response of P(cueO) to copper was also detected and might be stimulated by a putative CueR protein. Then, by using the counter-selectable marker lacZ and enhancing the expression of endonuclease I-SceI with tac promoter, a modified markerless gene disruption system was developed and the cueO gene disruption mutant (ΔcueO) of A. thiooxidans was successfully constructed with a markedly improved second homologous recombination frequency of 0.28 ± 0.048. The ΔcueO mutant was more sensitive to external copper and nearly completely lost the phenoloxidase activity; however, the activity could be restored after complementing the cueO gene. All results suggest the close relation of cueO gene to copper tolerance in A. thiooxidans. In addition, the developed efficient markerless gene knockout method can also be introduced into other Acidithiobacillus strains.

摘要

嗜酸生物浸矿细菌通常可以在高浓度的铜离子中存活,因为它们有特殊的生存环境。然而,对于生物浸矿细菌的重要成员氧化硫硫杆菌(Acidithiobacillus thiooxidans),人们对其铜稳态机制知之甚少。在这里,从氧化硫硫杆菌 ATCC 19377 的基因组草图中检测到一个假定的多铜氧化酶基因(cueO)。cueO 的转录水平对 10 mM CuSO₄的响应上调了 25.01 ± 2.59 倍。还检测到了 P(cueO)对铜的响应,可能受到一个假定的 CueR 蛋白的刺激。然后,通过使用可反向选择的标记 lacZ 和增强 tac 启动子的内切酶 I-SceI 的表达,开发了一种改良的无标记基因敲除系统,并成功构建了氧化硫硫杆菌的 cueO 基因敲除突变体(ΔcueO),其第二同源重组频率显著提高至 0.28 ± 0.048。ΔcueO 突变体对外部铜更敏感,几乎完全失去了酚氧化酶活性;然而,在补回 cueO 基因后,该活性可以恢复。所有结果表明 cueO 基因与氧化硫硫杆菌的铜耐受性密切相关。此外,开发的高效无标记基因敲除方法也可以引入到其他嗜酸硫杆菌菌株中。

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