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OmpR在适应高渗透压中的重要作用及其对连四硫酸盐代谢途径的调控

The Essential Role of OmpR in Adapting to the High Osmolarity and Its Regulation on the Tetrathionate-Metabolic Pathway.

作者信息

Chen Linxu, Liu Xiao, Gao Chang, Guan Yanan, Lin Jianqiang, Liu Xiangmei, Pang Xin

机构信息

State Key Laboratory of Microbial Technology, Shandong University, Qingdao 266237, China.

出版信息

Microorganisms. 2022 Dec 22;11(1):35. doi: 10.3390/microorganisms11010035.

Abstract

spp. are prevalent in acid mine drainage, and they have been widely used in biomining for extracting nonferrous metals from ores. The osmotic stress generated by elevated concentrations of inorganic ions is a severe challenge for the growth of spp. in the bioleaching process; however, the adaptation mechanism of these bacteria to high osmotic pressure remains unclear. In this study, bioinformatics analysis indicated that the osmotic stress response two-component system EnvZ-OmpR is widely distributed in spp., while OmpRs from spp. exhibited a far more evolutionary relationship with the well-studied OmpRs in and . The growth measurement of an () -knockout strain demonstrated that OmpR is essential in the adaptation of this bacterium to high osmotic stress. The overall impact of OmpR on the various metabolic and regulatory systems of was revealed by transcriptome analysis. The OmpR binding sequences of differentially expressed genes (DEGs) were predicted, and the OmpR box motif in was analysed. The direct and negative regulation of EnvZ-OmpR on the tetrathionate-metabolic () cluster in was discovered for the first time, and a co-regulation mode mediated by EnvZ-OmpR and RsrS-RsrR for the tetrathionate intermediate thiosulfate-oxidizing (SI) pathway in this microorganism was proposed. This study reveals that EnvZ-OmpR is an indispensable regulatory system for the ability of to cope with high osmotic stress and the significance of EnvZ-OmpR on the regulation of sulfur metabolism in adapting to the high-salt environment.

摘要

某些物种在酸性矿山排水中普遍存在,并且它们已被广泛用于生物采矿以从矿石中提取有色金属。无机离子浓度升高所产生的渗透胁迫是生物浸出过程中某些物种生长面临的严峻挑战;然而,这些细菌对高渗透压的适应机制仍不清楚。在本研究中,生物信息学分析表明渗透胁迫响应双组分系统EnvZ - OmpR广泛分布于某些物种中,而来自某些物种的OmpR与在[具体物种1]和[具体物种2]中经过充分研究的OmpR表现出更为密切的进化关系。对一株[具体菌株名称]()敲除菌株的生长测量表明,OmpR对于该细菌适应高渗透胁迫至关重要。转录组分析揭示了OmpR对[具体物种名称]各种代谢和调节系统的总体影响。预测了差异表达基因(DEGs)的OmpR结合序列,并分析了[具体物种名称]中的OmpR框基序。首次发现EnvZ - OmpR对[具体物种名称]中连四硫酸盐代谢()簇具有直接的负调控作用,并提出了EnvZ - OmpR和RsrS - RsrR介导的对该微生物中连四硫酸盐中间产物硫代硫酸盐氧化(SI)途径的共调控模式。本研究揭示了EnvZ - OmpR是[具体物种名称]应对高渗透胁迫能力不可或缺的调节系统,以及EnvZ - OmpR在[具体物种名称]适应高盐环境中对硫代谢调节的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d9f5/9861516/3f818ec5d20d/microorganisms-11-00035-g001.jpg

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