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染色体结构模型。

Models of chromosome structure.

机构信息

Universita' di Napoli "Federico II", Dipartimento di Fisica, INFN Sezione di Napoli, CNR-SPIN, Complesso Universitario di Monte S. Angelo, Via Cintia, 80126 Napoli, Italy.

Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Robert Rössle Strasse 10, 13125 Berlin-Buch, Germany.

出版信息

Curr Opin Cell Biol. 2014 Jun;28:90-5. doi: 10.1016/j.ceb.2014.04.004. Epub 2014 May 4.


DOI:10.1016/j.ceb.2014.04.004
PMID:24804566
Abstract

Understanding the mechanisms that control chromosome folding in the nucleus of eukaryotes and their contribution to gene regulation is a key open issue in molecular biology. Microscopy and chromatin-capture techniques have shown that chromatin has a complex organization, which dynamically changes across organisms and cell types. The need to make sense of such a fascinating complexity has prompted the development of quantitative models from physics, to find the principles of chromosome folding, its origin and function. Here, we concisely review recent advances in chromosome modeling, focusing on a recently proposed framework, the Strings & Binders Switch (SBS) model, which recapitulates key features of chromosome organization in space and time.

摘要

理解控制真核生物核内染色体折叠的机制及其对基因调控的贡献是分子生物学中的一个关键开放性问题。显微镜和染色质捕获技术表明,染色质具有复杂的组织,在不同的生物体和细胞类型中动态变化。为了理解这种引人入胜的复杂性,人们从物理学的角度开发了定量模型,以发现染色体折叠、起源和功能的原理。在这里,我们简要回顾了染色体建模的最新进展,重点介绍了最近提出的框架——Strings & Binders Switch (SBS) 模型,该模型在时空上再现了染色体组织的关键特征。

相似文献

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[2]
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[5]
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[7]
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[8]
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[9]
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[10]
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引用本文的文献

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Nat Commun. 2024-5-21

[2]
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[3]
Partition complex structure can arise from sliding and bridging of ParB dimers.

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[4]
Stochastic motion and transcriptional dynamics of pairs of distal DNA loci on a compacted chromosome.

Science. 2023-6-30

[5]
Unveiling the Machinery behind Chromosome Folding by Polymer Physics Modeling.

Int J Mol Sci. 2023-2-11

[6]
Stochastic motion and transcriptional dynamics of pairs of distal DNA loci on a compacted chromosome.

bioRxiv. 2023-2-13

[7]
Loop-extrusion and polymer phase-separation can co-exist at the single-molecule level to shape chromatin folding.

Nat Commun. 2022-7-13

[8]
Genome-wide maps of nucleolus interactions reveal distinct layers of repressive chromatin domains.

Nat Commun. 2022-3-18

[9]
Uncovering the Principles of Genome Folding by 3D Chromatin Modeling.

Cold Spring Harb Perspect Biol. 2022-6-14

[10]
Molecular Complexes at Euchromatin, Heterochromatin and Centromeric Chromatin.

Int J Mol Sci. 2021-6-28

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