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巴拿马城单家门诊的结核分枝杆菌分离株表现出广泛的遗传多样性。

Mycobacterium tuberculosis isolates from single outpatient clinic in Panama City exhibit wide genetic diversity.

机构信息

Tuberculosis Biomarker Research Unit, Centro de Biología Celular y Molecular de las Enfermedades (CBCME) del Instituto de Investigaciones Científicas y Servicios de Alta Tecnología (INDICASAT AIP), Ciudad del Saber, Panamá; Department of Biotechnology, Acharya Nagarjuna University, Guntur, India; Laboratorio Clínico, Complejo Hospitalario Metropolitano Dr. Arnulfo Arias Madrid, Caja de Seguro Social (CHMDrAAM-CSS), Panamá, Panamá; Departamento de Ciencias de Laboratorio Clínico, Facultad de Medicina, Universidad de Panamá, Panamá, Panamá

出版信息

Am J Trop Med Hyg. 2014 Aug;91(2):310-2. doi: 10.4269/ajtmh.14-0134. Epub 2014 May 27.

Abstract

Understanding Mycobacterium tuberculosis biodiversity and transmission is significant for tuberculosis control. This short report aimed to determine the genetic diversity of M. tuberculosis isolates from an outpatient clinic in Panama City. A total of 62 M. tuberculosis isolates were genotyped by 12 loci mycobacterial interspersed repetitive units-variable number of tandem repeats (MIRU-VNTR) and Spoligotyping. Forty-five (72.6%) of the isolates showed unique MIRU-VNTR genotypes, and 13 (21%) of the isolates were grouped into four clusters. Four isolates showed polyclonal MIRU-VNTR genotypes. The MIRU-VNTR Hunter-Gaston discriminatory index reached 0.988. The Spoligotyping analysis revealed 16 M. tuberculosis families, including Latin American-Mediterranean, Harlem, and Beijing. These findings suggest a wide genetic diversity of M. tuberculosis isolates at one outpatient clinic. A detailed molecular epidemiology survey is now warranted, especially following second massive immigration for local Panama Canal expansion activities.

摘要

了解结核分枝杆菌的生物多样性和传播对于结核病控制至关重要。本短篇报告旨在确定巴拿马城一家门诊结核分枝杆菌分离株的遗传多样性。对 62 株结核分枝杆菌分离株进行了 12 个基因座分枝杆菌间隔重复单元可变数量串联重复(MIRU-VNTR)和 spoligotyping 基因分型。45 株(72.6%)分离株显示独特的 MIRU-VNTR 基因型,13 株(21%)分离株分为 4 个聚类。4 株分离株显示多克隆 MIRU-VNTR 基因型。MIRU-VNTR Hunter-Gaston 区分指数达到 0.988。 spoligotyping 分析显示 16 个结核分枝杆菌家族,包括拉丁美洲-地中海、哈林和北京家族。这些发现表明,一家门诊结核分枝杆菌分离株具有广泛的遗传多样性。现在需要进行详细的分子流行病学调查,特别是在当地巴拿马运河扩建活动的第二次大规模移民之后。

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