A simple image correction method for high-throughput microscopy.
作者信息
Coster Adam D, Wichaidit Chonlarat, Rajaram Satwik, Altschuler Steven J, Wu Lani F
机构信息
Green Center for Systems Biology, University of Texas Southwestern Medical Center, Dallas, Texas, USA.
出版信息
Nat Methods. 2014 Jun;11(6):602. doi: 10.1038/nmeth.2971.
Abstract
摘要
相似文献
1
A simple image correction method for high-throughput microscopy.一种用于高通量显微镜的简单图像校正方法。
Nat Methods. 2014 Jun;11(6):602. doi: 10.1038/nmeth.2971.
2
Annotated high-throughput microscopy image sets for validation.用于验证的带注释的高通量显微镜图像集。
Nat Methods. 2012 Jun 28;9(7):637. doi: 10.1038/nmeth.2083.
3
Histopathological Image Analysis: Path to Acceptance through Evaluation.组织病理学图像分析：通过评估实现认可之路。
Microsc Microanal. 2016 Jul;22(Suppl 3):1004-1005. doi: 10.1017/S1431927616005869. Epub 2016 Jul 25.
4
Caterina Strambio-De-Castillia.卡特琳娜·斯特兰比奥-德-卡斯蒂利亚
Nat Methods. 2021 Dec;18(12):1413. doi: 10.1038/s41592-021-01342-w.
5
An automatic method for robust and fast cell detection in bright field images from high-throughput microscopy.一种用于高通量显微镜明场图像中进行稳健快速细胞检测的自动方法。
BMC Bioinformatics. 2013 Oct 4;14:297. doi: 10.1186/1471-2105-14-297.
6
Veracity of raw images can also come into question.原始图像的准确性也可能受到质疑。
Nature. 2005 Jun 9;435(7043):736. doi: 10.1038/435736b.
7
CIDRE: an illumination-correction method for optical microscopy.CIDRE：一种用于光学显微镜的照明校正方法。
Nat Methods. 2015 May;12(5):404-6. doi: 10.1038/nmeth.3323. Epub 2015 Mar 16.
8
Designing a rigorous microscopy experiment: Validating methods and avoiding bias.设计严谨的显微镜实验：验证方法和避免偏倚。
J Cell Biol. 2019 May 6;218(5):1452-1466. doi: 10.1083/jcb.201812109. Epub 2019 Mar 20.
9
Correction of uneven illumination (vignetting) in digital microscopy images.数字显微镜图像中不均匀光照（渐晕）的校正。
J Clin Pathol. 2003 Aug;56(8):619-21. doi: 10.1136/jcp.56.8.619.
10
Avoiding a replication crisis in deep-learning-based bioimage analysis.避免基于深度学习的生物图像分析中的复制危机。
Nat Methods. 2021 Oct;18(10):1136-1144. doi: 10.1038/s41592-021-01284-3.
引用本文的文献
1
A deep learning-based stripe self-correction method for stitched microscopic images.一种用于拼接显微图像的基于深度学习的条纹自校正方法。
Nat Commun. 2023 Sep 5;14(1):5393. doi: 10.1038/s41467-023-41165-1.
2
A BaSiC tool for background and shading correction of optical microscopy images.光学显微镜图像背景和阴影校正的基础工具。
Nat Commun. 2017 Jun 8;8:14836. doi: 10.1038/ncomms14836.
3
Examining Crosstalk among Transforming Growth Factor β, Bone Morphogenetic Protein, and Wnt Pathways.研究转化生长因子β、骨形态发生蛋白和Wnt信号通路之间的相互作用
J Biol Chem. 2017 Jan 6;292(1):244-250. doi: 10.1074/jbc.M116.759654. Epub 2016 Nov 28.
4
Adaptive and Background-Aware GAL4 Expression Enhancement of Co-registered Confocal Microscopy Images.自适应和背景感知的共聚焦显微镜图像的 GAL4 表达增强。
Neuroinformatics. 2016 Apr;14(2):221-33. doi: 10.1007/s12021-015-9289-y.
5
A journey to uncharted territory: new technical frontiers in studying tumor-stromal cell interactions.探索未知领域之旅：肿瘤-基质细胞相互作用研究的新技术前沿
Integr Biol (Camb). 2015 Feb;7(2):153-61. doi: 10.1039/c4ib00192c.
6
GSK-3 modulates cellular responses to a broad spectrum of kinase inhibitors.GSK-3 调节细胞对广泛的激酶抑制剂的反应。
Nat Chem Biol. 2015 Jan;11(1):58-63. doi: 10.1038/nchembio.1690. Epub 2014 Nov 17.
本文引用的文献
1
Systematic error detection in experimental high-throughput screening.实验高通量筛选中的系统误差检测。
BMC Bioinformatics. 2011 Jan 19;12:25. doi: 10.1186/1471-2105-12-25.
2
Retrospective shading correction based on entropy minimization.基于熵最小化的回顾性阴影校正。
J Microsc. 2000 Mar;197(Pt 3):285-95. doi: 10.1046/j.1365-2818.2000.00669.x.
3
High resolution shading correction.
J Histochem Cytochem. 1974 Jul;22(7):751-4. doi: 10.1177/22.7.751.
Zotero 插件