Seferoglu A Bengisu, Koper Kaan, Can F Betul, Cevahir Gul, Kavakli I Halil
Department of Chemical and Biological Engineering, Koc University, Rumeli Feneri Yolu, 34450 Sariyer, Turkey.
Department of Molecular Biology and Genetics, Koc University, Rumeli Feneri Yolu, 34450 Sariyer, Turkey.
Plant Cell Physiol. 2014 Aug;55(8):1473-83. doi: 10.1093/pcp/pcu078. Epub 2014 Jun 1.
ADP-glucose pyrophosphorylase (AGPase) is a key allosteric enzyme in plant starch biosynthesis. Plant AGPase is a heterotetrameric enzyme that consists of large (LS) and small subunits (SS), which are encoded by two different genes. Computational and experimental studies have revealed that the heterotetrameric assembly of AGPase is thermodynamically weak. Modeling studies followed by the mutagenesis of the LS of the potato AGPase identified a heterotetramer-deficient mutant, LS(R88A). To enhance heterotetrameric assembly, LS(R88A) cDNA was subjected to error-prone PCR, and second-site revertants were identified according to their ability to restore glycogen accumulation, as assessed with iodine staining. Selected mutations were introduced into the wild-type (WT) LS and co-expressed with the WT SS in Escherichia coli glgC(-). The biochemical characterization of revertants revealed that LS(I90V)SS(WT), LS(Y378C)SS(WT) and LS(D410G)SS(WT) mutants displayed enhanced heterotetrameric assembly with the WT SS. Among these mutants, LS(Y378C)SS(WT) AGPase displayed increased heat stability compared with the WT enzyme. Kinetic characterization of the mutants indicated that the LS(I90V)SS(WT) and LS(Y378C)SS(WT) AGPases have comparable allosteric and kinetic properties. However, the LS(D410G)SS(WT) mutant exhibited altered allosteric properties of being less responsive and more sensitive to 3-phosphoglyceric acid activation and inorganic phosphate inhibition. This study not only enhances our understanding of the interaction between the SS and the LS of AGPase but also enables protein engineering to obtain enhanced assembled heat-stable variants of AGPase, which can be used for the improvement of plant yields.
ADP - 葡萄糖焦磷酸化酶(AGPase)是植物淀粉生物合成中的一种关键变构酶。植物AGPase是一种异源四聚体酶,由大亚基(LS)和小亚基(SS)组成,这两个亚基由两个不同的基因编码。计算和实验研究表明,AGPase的异源四聚体组装在热力学上是不稳定的。对马铃薯AGPase的大亚基进行诱变后的建模研究确定了一个缺乏异源四聚体的突变体LS(R88A)。为了增强异源四聚体组装,对LS(R88A) cDNA进行易错PCR,并根据碘染色评估的恢复糖原积累的能力鉴定第二位点回复突变体。将选定的突变引入野生型(WT)大亚基,并与野生型小亚基在大肠杆菌glgC(-)中共同表达。回复突变体的生化特性表明,LS(I90V)SS(WT)、LS(Y378C)SS(WT)和LS(D410G)SS(WT)突变体与野生型小亚基显示出增强的异源四聚体组装。在这些突变体中,与野生型酶相比,LS(Y378C)SS(WT) AGPase表现出更高的热稳定性。突变体的动力学特性表明,LS(I90V)SS(WT)和LS(Y378C)SS(WT) AGPases具有相当的变构和动力学特性。然而,LS(D410G)SS(WT)突变体表现出改变的变构特性,对3 - 磷酸甘油酸激活和无机磷酸盐抑制的反应性降低且更敏感。这项研究不仅增进了我们对AGPase小亚基和大亚基之间相互作用的理解,还使蛋白质工程能够获得增强组装的热稳定AGPase变体,可用于提高植物产量。