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新型硫丹类似物的合成与晶体结构:作为胆碱酯酶抑制剂的分子对接、QSAR 研究及固态氢键分析。

Synthesis and crystal structure of new temephos analogues as cholinesterase inhibitor: molecular docking, QSAR study, and hydrogen bonding analysis of solid state.

机构信息

Department of Chemistry, Tarbiat Modares University , P.O. Box 14115-175, Tehran, Iran.

出版信息

J Agric Food Chem. 2014 Jun 25;62(25):5761-71. doi: 10.1021/jf5011726. Epub 2014 Jun 16.

Abstract

A series of temephos (Tem) derivatives were synthesized and characterized by 31P, 13C, and 1H NMR and FT-IR spectral techniques. Also, the crystal structure of compound 9 was investigated. The hydrogen bonding energies (E2) were calculated by NBO analysis of the crystal cluster. The activities and the mixed-type mechanism of Tem derivatives were evaluated using the modified Ellman's and Lineweaver-Burk's methods on cholinesterase (ChE) enzymes. The inhibitory activities of Tem derivatives with a P═S moiety were higher than those with a P═O moiety. Docking analysis disclosed that the hydrogen bonds occurred between the OR (R=CH3 and C2H5) oxygen and N-H nitrogen atoms of the selected compounds and the receptor site (GLN and GLU) of ChEs. PCA-QSAR indicated that the correlation coefficients of the electronic variables were dominant compared to the structural descriptors. MLR-QSAR models clarified that the net charges of nitrogen and phosphorus atoms contribute important electronic function in the inhibition of ChEs. The validity of the QSAR model was confirmed by a LOO cross-validation method with q2=0.965 between the training and testing sets.

摘要

一系列的噻虫磷(Tem)衍生物被合成并通过 31P、13C 和 1H NMR 以及 FT-IR 光谱技术进行了表征。此外,还研究了化合物 9 的晶体结构。通过晶体簇的 NBO 分析计算了氢键能(E2)。采用改良的 Ellman 和 Lineweaver-Burk 方法对胆碱酯酶(ChE)酶评估 Tem 衍生物的活性和混合型机制。具有 P═S 部分的 Tem 衍生物的抑制活性高于具有 P═O 部分的 Tem 衍生物。对接分析表明,氢键发生在 OR(R=CH3 和 C2H5)氧原子和所选化合物的 N-H 氮原子与 ChE 的受体位点(GLN 和 GLU)之间。PCA-QSAR 表明,与结构描述符相比,电子变量的相关系数更为重要。MLR-QSAR 模型表明,氮原子和磷原子的净电荷对 ChE 抑制具有重要的电子功能。通过 LOO 交叉验证方法验证了 QSAR 模型的有效性,训练集和测试集之间的 q2=0.965。

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