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黄质单胞菌属(Chitinimonas)新种,分离自湖水。

Chitinimonas prasina sp. nov., isolated from lake water.

机构信息

State Key Laboratory for Marine Environmental Sciences and Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, School of Life Sciences, Xiamen University, Xiamen 361005, PR China.

Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration, PR China.

出版信息

Int J Syst Evol Microbiol. 2014 Sep;64(Pt 9):3005-3009. doi: 10.1099/ijs.0.061234-0. Epub 2014 Jun 6.

Abstract

A Gram-stain-negative, elongated rod-shaped, motile by gliding, green-pigmented, aerobic bacterial strain, designated LY03(T), was isolated from lake water in Xiamen, Fujian Province, China. Phylogenetic analysis based on 16S rRNA gene sequencing revealed that the isolate was a member of the genus Chitinimonas, which belongs to the family Burkholderiaceae. Strain LY03(T) was most closely related to Chitinimonas taiwanensis LMG 22011(T) (96.02 % 16S rRNA gene sequence similarity), followed by Chitinimonas koreensis KACC 11467(T) (94.85 %), and the three strains formed a distinct lineage from other strains in the phylogenetic analyses. Optimum conditions for growth were 37 °C, pH 7-9 and without NaCl. The major fatty acids were summed feature 3 (C16 : 1ω6c and/or C16 : 1ω7c), C16 : 0 and C10 : 0 3-OH. The DNA G+C content of strain LY03(T) was 63.6 mol% and the major respiratory quinone was ubiquinone-8 (Q-8). The polar lipids were found to consist of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, unknown polar lipids and unidentified phospholipids. Differential phenotypic properties and phylogenetic distinctiveness distinguished strain LY03(T) from all other members of the genus Chitinimonas. On the basis of its morphology, physiology, fatty acid composition and 16S rRNA gene sequence data, strain LY03(T) represents a novel species of the genus Chitinimonas, for which the name Chitinimonas prasina sp. nov. is proposed. The type strain is LY03(T) ( = MCCC 1F01209(T) = KCTC 32574(T)).

摘要

一株革兰氏阴性、长杆状、可通过滑行运动的、呈绿色的需氧细菌菌株,被命名为 LY03(T),从中国福建省厦门市的湖水样本中分离得到。基于 16S rRNA 基因测序的系统发育分析表明,该分离株是沙雷氏菌科沙雷氏菌属的一个成员。菌株 LY03(T)与台湾沙雷氏菌 LMG 22011(T)(96.02% 16S rRNA 基因序列相似度)最为密切相关,其次是韩国沙雷氏菌 KACC 11467(T)(94.85%),这三个菌株在系统发育分析中与其他菌株形成了一个独特的分支。最适生长条件为 37°C、pH7-9 和无 NaCl。主要脂肪酸为 C16:1ω6c 和/或 C16:1ω7c、C16:0 和 C10:0 3-OH。菌株 LY03(T)的 DNA G+C 含量为 63.6mol%,主要呼吸醌为泛醌-8 (Q-8)。极性脂由双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、未知极性脂和未鉴定的磷脂组成。菌株 LY03(T)在表型特性和系统发育上与沙雷氏菌属的所有其他成员都有明显的区别。基于其形态、生理、脂肪酸组成和 16S rRNA 基因序列数据,菌株 LY03(T)代表沙雷氏菌属的一个新种,命名为 Chitinimonas prasina sp. nov.。其模式菌株为 LY03(T)( = MCCC 1F01209(T) = KCTC 32574(T))。

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