Blocquel David, Habchi Johnny, Durand Eric, Sevajol Marion, Ferron François, Erales Jenny, Papageorgiou Nicolas, Longhi Sonia
Aix-Marseille University, AFMB UMR 7257, 13288 Marseille, France.
Acta Crystallogr D Biol Crystallogr. 2014 Jun;70(Pt 6):1589-603. doi: 10.1107/S139900471400234X. Epub 2014 May 24.
The structures of two constructs of the measles virus (MeV) phosphoprotein (P) multimerization domain (PMD) are reported and are compared with a third structure published recently by another group [Communie et al. (2013), J. Virol. 87, 7166-7169]. Although the three structures all have a tetrameric and parallel coiled-coil arrangement, structural comparison unveiled considerable differences in the quaternary structure and unveiled that the three structures suffer from significant structural deformation induced by intermolecular interactions within the crystal. These results show that crystal packing can bias conclusions about function and mechanism based on analysis of a single crystal structure, and they challenge to some extent the assumption according to which coiled-coil structures can be reliably predicted from the amino-acid sequence. Structural comparison also highlighted significant differences in the extent of disorder in the C-terminal region of each monomer. The differential flexibility of the C-terminal region is also supported by size-exclusion chromatography and small-angle X-ray scattering studies, which showed that MeV PMD exists in solution as a dynamic equilibrium between two tetramers of different compaction. Finally, the possible functional implications of the flexibility of the C-terminal region of PMD are discussed.
报道了麻疹病毒(MeV)磷蛋白(P)多聚化结构域(PMD)两种构建体的结构,并与另一研究小组最近发表的第三种结构进行了比较[Communie等人(2013年),《病毒学杂志》87卷,7166 - 7169页]。尽管这三种结构均具有四聚体和平行卷曲螺旋排列,但结构比较揭示了四级结构存在相当大的差异,且表明这三种结构因晶体内分子间相互作用而遭受显著的结构变形。这些结果表明,晶体堆积可能会使基于单晶结构分析得出的关于功能和机制的结论产生偏差,并且在一定程度上对根据氨基酸序列可靠预测卷曲螺旋结构的假设提出了挑战。结构比较还突出了每个单体C末端区域无序程度的显著差异。尺寸排阻色谱和小角X射线散射研究也支持了C末端区域的差异灵活性,这些研究表明MeV PMD在溶液中以两种不同紧密程度的四聚体之间的动态平衡形式存在。最后,讨论了PMD C末端区域灵活性可能的功能意义。