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通过分子剪裁方法估算分子内O-H···O═C氢键能。第一部分:脂肪族结构。

Estimation of the intramolecular O-H···O═C hydrogen bond energy via the molecular tailoring approach. Part I: aliphatic structures.

作者信息

Rusinska-Roszak Danuta, Sowinski Grzegorz

机构信息

Institute of Chemical Technology and Engineering, Poznan University of Technology , Pl. M. Sklodowskiej-Curie 2, 60-965 Poznan, Poland.

出版信息

J Chem Inf Model. 2014 Jul 28;54(7):1963-77. doi: 10.1021/ci500107w. Epub 2014 Jun 27.

Abstract

A simple and universal method for the estimation of the intramolecular hydrogen bond (HB) energy (E(HB)) in hydroxycarbonyl aliphatic compounds is proposed by the application of the molecular tailoring approach (MTA) based on calculations at the second-order Møller-Plesset MP2 level. The calculation of EHB can be realized by the one optimization and three single point calculations of the energy for each compound with carbonyl and hydroxyl groups involved in HB. The intramolecular hydrogen bond energies estimated for 153 structures (of 102 compounds) ranged from 1.4 to 13.7 kcal/mol for systems without resonance-assisted hydrogen bonding (RAHB). To verify the method, we show the correlations of the energy (E(HB)) in six-, seven-, and eight-membered HB rings in the optimized multifunctional molecules with the usual geometry descriptors of hydrogen bonds. Moreover, topological parameters from the atoms in molecules (AIM) theory and the calculated infrared and proton NMR spectra are correlated. The effects of conjugation and π-electron delocalization, bifurcation, and cooperativity are discussed, along with the correlation between the strength and geometrical parameters of H bonding.

摘要

基于二阶Møller-Plesset MP2水平的计算,通过应用分子剪裁方法(MTA),提出了一种简单通用的方法来估算羟基羰基脂肪族化合物中的分子内氢键(HB)能量(E(HB))。对于每个涉及HB的含有羰基和羟基的化合物,通过一次能量优化和三次单点能量计算,即可实现EHB的计算。对于153个结构(属于102种化合物),在无共振辅助氢键(RAHB)的体系中,估算得到的分子内氢键能量范围为1.4至13.7千卡/摩尔。为验证该方法,我们展示了优化后的多功能分子中六元、七元和八元HB环的能量(E(HB))与氢键常见几何描述符之间的相关性。此外,还关联了分子中的原子(AIM)理论的拓扑参数以及计算得到的红外光谱和质子核磁共振光谱。讨论了共轭和π电子离域、分叉和协同作用的影响,以及氢键强度与几何参数之间的相关性。

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