Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.
BioSystems and Micromechanics (BioSyM) IRG, Singapore-MIT Alliance for Research and Technology (SMART) Centre, Republic of Singapore 117543.
Biomicrofluidics. 2014 May 14;8(3):034103. doi: 10.1063/1.4878135. eCollection 2014 May.
We experimentally demonstrate that addition of small, charge-neutral polymers to a buffer solution can promote compression of dilute solutions of single electrophoresing DNA. This phenomenon contrasts with the observed extension of DNA during capillary electrophoresis in dilute solutions of high molecular weight polymers. We propose these discrepancies in micron-scale DNA configurations arise from different nano-scale DNA-polymer collision events, controlled by solute polymer properties. We build upon theories previously proposed for intermolecular DNA aggregation in polymer-free solutions to develop scaling theories that describe trends seen in our data for intramolecular DNA compaction in dilute polymer solutions.
我们通过实验证明,在缓冲溶液中添加少量的中性带电聚合物可以促进稀溶液中单链电泳 DNA 的压缩。这一现象与在高分子量聚合物的稀溶液中观察到的 DNA 在毛细管电泳中的伸展形成对比。我们认为微米级 DNA 构象的这些差异源于不同的纳米级 DNA-聚合物碰撞事件,这些事件由溶质聚合物性质控制。我们以前曾提出过无聚合物溶液中分子间 DNA 聚集的理论,在此基础上建立了可以描述我们在稀聚合物溶液中观察到的分子内 DNA 压缩趋势的标度理论。