Carr Jennifer F, Gregory Steven T, Dahlberg Albert E
Department of Molecular Biology, Cell Biology and Biochemistry, Brown University, 185 Meeting St, Providence, RI, 02912, USA,
Extremophiles. 2015 Jan;19(1):221-8. doi: 10.1007/s00792-014-0663-8. Epub 2014 Jun 20.
Thermus thermophilus is an extremely thermophilic bacterium that grows between 50 and 80 °C and is an excellent model organism not only for understanding life at high temperature but also for its biotechnological and industrial applications. Multiple molecular capabilities are available including targeted gene inactivation and the use of shuttle plasmids that replicate in T. thermophilus and Escherichia coli; however, the ability to disrupt gene function randomly by transposon insertion has not been developed. Here we report a detailed method of transposon mutagenesis of T. thermophilus HB27 based on the EZ-Tn5 system from Epicentre Biotechnologies. We were able to generate insertion mutations throughout the chromosome by in vitro transposition and transformation with mutagenized genomic DNA. We also report that an additional step, one that fills in single stranded gaps in donor DNA generated by the transposition reaction, was essential for successful mutagenesis. We anticipate that our method of transposon mutagenesis will enable further genetic development of T. thermophilus and may also be valuable for similar endeavors with other under-developed organisms.
嗜热栖热菌是一种极端嗜热细菌,生长温度在50至80°C之间,它不仅是理解高温环境下生命现象的优秀模式生物,还在生物技术和工业应用方面具有重要价值。目前已有多种分子操作手段,包括靶向基因失活以及使用能在嗜热栖热菌和大肠杆菌中复制的穿梭质粒;然而,通过转座子插入随机破坏基因功能的能力尚未得到开发。在此,我们报告一种基于Epicentre Biotechnologies公司EZ-Tn5系统的嗜热栖热菌HB27转座子诱变详细方法。我们能够通过体外转座和用诱变基因组DNA转化在整个染色体上产生插入突变。我们还报告称,一个额外步骤,即填补转座反应产生的供体DNA单链缺口的步骤,对于成功诱变至关重要。我们预计,我们的转座子诱变方法将推动嗜热栖热菌的进一步遗传研究发展,对于其他未充分开发的生物体的类似研究也可能具有重要价值。