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牙鲆胰岛素样生长因子结合蛋白-4(IGFBP-4)的分子克隆、表达谱及启动子分析

Molecular cloning, expression profiles and promoter analysis of insulin-like growth factor binding protein-4 (IGFBP-4) in Japanese flounder (Paralichthys olivaceus).

作者信息

Wang Jing, Gao Jinning, Wang Wenji, Ma Liman, Liu Mengmeng, Yu Haiyang, Wang Zhigang, Wang Xubo, Qi Jie, Zhang Quanqi

机构信息

College of Marine Life Sciences, Ocean University of China, Key Laboratory of Marine Genetics and Breeding, Ministry of Education, #5 Yushan Road, Qingdao 266003, China.

College of Marine Life Sciences, Ocean University of China, Key Laboratory of Marine Genetics and Breeding, Ministry of Education, #5 Yushan Road, Qingdao 266003, China.

出版信息

Comp Biochem Physiol B Biochem Mol Biol. 2014 Sep;175:41-52. doi: 10.1016/j.cbpb.2014.06.007. Epub 2014 Jun 28.

Abstract

We cloned and characterized cDNA sequence of insulin-like growth factor binding protein-4 (IGFBP-4) from Japanese flounder (Paralichthys olivaceus). The 1493 bp full-length cDNA sequence contained an open reading frame (ORF) of 780 bp, which encoded a protein of 259 amino acids. The deduced amino acid sequences included a putative signal peptide of 28 amino acid residues resulting in a mature protein of 231 amino acids. Twenty cysteine residues and two conserved IGFBPs motif (GCGCCXXC and CWCV) were found in the N- and C-terminal domain. In the over 13 kbp genomic sequence, four exons, three introns, and 5'-/3'-flanking sequences were identified. Sequence alignment and phylogenetic analysis showed that Japanese flounder IGFBP-4 was indeed the ortholog of the human IGFBP-4 gene and shared high identities with other teleost IGFBP-4 genes. The promoter region was also analyzed and several potential transcription factor (TF) binding sites were determined which may modulate the IGFBP-4 expression. Quantitative real-time PCR analysis revealed that IGFBP-4 mRNA was observed in various tissues, with intestine showing the highest expression. The maternal transcripts of IGFBP-4 gene existed in the early embryonic stages and then increased in the following stages until hatching, suggesting that IGFBP-4 may be involved in the fish early development. The expression level of IGFBP-4 mRNA was relatively higher at 3 days post hatching (dph) and 15 dph, and gradually decreased during the metamorphosis period. All these results indicated that IGFBP-4 plays a significant role in IGF regulating vertebrate growth and development.

摘要

我们克隆并鉴定了来自牙鲆(Paralichthys olivaceus)的胰岛素样生长因子结合蛋白4(IGFBP - 4)的cDNA序列。1493 bp的全长cDNA序列包含一个780 bp的开放阅读框(ORF),其编码一个由259个氨基酸组成的蛋白质。推导的氨基酸序列包括一个由28个氨基酸残基组成的假定信号肽,产生一个由231个氨基酸组成的成熟蛋白。在N端和C端结构域中发现了20个半胱氨酸残基和两个保守的IGFBPs基序(GCGCCXXC和CWCV)。在超过13 kbp的基因组序列中,鉴定出四个外显子、三个内含子以及5'-/3'-侧翼序列。序列比对和系统发育分析表明,牙鲆IGFBP - 4确实是人类IGFBP - 4基因的直系同源物,并且与其他硬骨鱼IGFBP - 4基因具有高度同源性。还对启动子区域进行了分析,并确定了几个可能调节IGFBP - 4表达的潜在转录因子(TF)结合位点。定量实时PCR分析显示,IGFBP - 4 mRNA在各种组织中均有表达,其中肠道表达最高。IGFBP - 4基因的母源转录本在胚胎早期阶段存在,随后在接下来的阶段增加直至孵化,这表明IGFBP - 4可能参与鱼类早期发育。IGFBP - 4 mRNA的表达水平在孵化后3天(dph)和15 dph时相对较高,在变态期逐渐下降。所有这些结果表明,IGFBP - 4在IGF调节脊椎动物生长和发育中起重要作用。

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