• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

二维和三维线粒体形态及网络特性的自动定量与综合分析

Automated quantification and integrative analysis of 2D and 3D mitochondrial shape and network properties.

作者信息

Nikolaisen Julie, Nilsson Linn I H, Pettersen Ina K N, Willems Peter H G M, Lorens James B, Koopman Werner J H, Tronstad Karl J

机构信息

Department of Biomedicine, University of Bergen, Bergen, Norway.

Department of Biochemistry (286), Nijmegen Centre for Molecular Life Sciences, Radboud University Medical Centre, Nijmegen, The Netherlands.

出版信息

PLoS One. 2014 Jul 2;9(7):e101365. doi: 10.1371/journal.pone.0101365. eCollection 2014.

DOI:10.1371/journal.pone.0101365
PMID:24988307
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4079598/
Abstract

Mitochondrial morphology and function are coupled in healthy cells, during pathological conditions and (adaptation to) endogenous and exogenous stress. In this sense mitochondrial shape can range from small globular compartments to complex filamentous networks, even within the same cell. Understanding how mitochondrial morphological changes (i.e. "mitochondrial dynamics") are linked to cellular (patho) physiology is currently the subject of intense study and requires detailed quantitative information. During the last decade, various computational approaches have been developed for automated 2-dimensional (2D) analysis of mitochondrial morphology and number in microscopy images. Although these strategies are well suited for analysis of adhering cells with a flat morphology they are not applicable for thicker cells, which require a three-dimensional (3D) image acquisition and analysis procedure. Here we developed and validated an automated image analysis algorithm allowing simultaneous 3D quantification of mitochondrial morphology and network properties in human endothelial cells (HUVECs). Cells expressing a mitochondria-targeted green fluorescence protein (mitoGFP) were visualized by 3D confocal microscopy and mitochondrial morphology was quantified using both the established 2D method and the new 3D strategy. We demonstrate that both analyses can be used to characterize and discriminate between various mitochondrial morphologies and network properties. However, the results from 2D and 3D analysis were not equivalent when filamentous mitochondria in normal HUVECs were compared with circular/spherical mitochondria in metabolically stressed HUVECs treated with rotenone (ROT). 2D quantification suggested that metabolic stress induced mitochondrial fragmentation and loss of biomass. In contrast, 3D analysis revealed that the mitochondrial network structure was dissolved without affecting the amount and size of the organelles. Thus, our results demonstrate that 3D imaging and quantification are crucial for proper understanding of mitochondrial shape and topology in non-flat cells. In summary, we here present an integrative method for unbiased 3D quantification of mitochondrial shape and network properties in mammalian cells.

摘要

在健康细胞、病理状态以及(对内源和外源应激的)适应过程中,线粒体形态与功能相互关联。从这个意义上讲,即使在同一细胞内,线粒体形态也可以从小球状区室到复杂的丝状网络不等。了解线粒体形态变化(即“线粒体动力学”)如何与细胞(病理)生理学相关联,是当前深入研究的课题,需要详细的定量信息。在过去十年中,已经开发了各种计算方法,用于对显微镜图像中线粒体形态和数量进行自动二维(2D)分析。尽管这些策略非常适合分析形态扁平的贴壁细胞,但不适用于较厚的细胞,后者需要三维(3D)图像采集和分析程序。在这里,我们开发并验证了一种自动图像分析算法,可同时对人内皮细胞(HUVECs)中线粒体形态和网络特性进行3D定量分析。通过3D共聚焦显微镜观察表达线粒体靶向绿色荧光蛋白(mitoGFP)的细胞,并使用既定的2D方法和新的3D策略对线粒体形态进行定量分析。我们证明,这两种分析方法均可用于表征和区分各种线粒体形态和网络特性。然而,当将正常HUVECs中的丝状线粒体与用鱼藤酮(ROT)处理的代谢应激HUVECs中的圆形/球形线粒体进行比较时,2D和3D分析的结果并不相同。2D定量分析表明,代谢应激导致线粒体碎片化和生物量损失。相比之下,3D分析显示线粒体网络结构被溶解,但不影响细胞器的数量和大小。因此,我们的结果表明,3D成像和定量分析对于正确理解非扁平细胞中线粒体的形状和拓扑结构至关重要。总之,我们在此提出了一种用于无偏3D定量分析哺乳动物细胞中线粒体形状和网络特性的综合方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/9d60a4f9cac5/pone.0101365.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/19a9ddc4ad32/pone.0101365.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/4ff4c535f000/pone.0101365.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/ab34d5bd8027/pone.0101365.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/08a36dcb2164/pone.0101365.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/e72e7c81e203/pone.0101365.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/15db5c4399e7/pone.0101365.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/cd24eb1b0332/pone.0101365.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/9d60a4f9cac5/pone.0101365.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/19a9ddc4ad32/pone.0101365.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/4ff4c535f000/pone.0101365.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/ab34d5bd8027/pone.0101365.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/08a36dcb2164/pone.0101365.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/e72e7c81e203/pone.0101365.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/15db5c4399e7/pone.0101365.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/cd24eb1b0332/pone.0101365.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dee/4079598/9d60a4f9cac5/pone.0101365.g008.jpg

相似文献

1
Automated quantification and integrative analysis of 2D and 3D mitochondrial shape and network properties.二维和三维线粒体形态及网络特性的自动定量与综合分析
PLoS One. 2014 Jul 2;9(7):e101365. doi: 10.1371/journal.pone.0101365. eCollection 2014.
2
An analytical tool that quantifies cellular morphology changes from three-dimensional fluorescence images.一种可对三维荧光图像中的细胞形态变化进行量化的分析工具。
J Vis Exp. 2012 Aug 31(66):e4233. doi: 10.3791/4233.
3
A faster, high resolution, mtPA-GFP-based mitochondrial fusion assay acquiring kinetic data of multiple cells in parallel using confocal microscopy.一种基于mtPA-GFP的更快、高分辨率线粒体融合检测方法,可利用共聚焦显微镜并行获取多个细胞的动力学数据。
J Vis Exp. 2012 Jul 20(65):e3991. doi: 10.3791/3991.
4
A pipeline for multidimensional confocal analysis of mitochondrial morphology, function, and dynamics in pancreatic β-cells.用于胰腺β细胞中线粒体形态、功能和动态的多维共聚焦分析的流水线。
Am J Physiol Endocrinol Metab. 2020 Feb 1;318(2):E87-E101. doi: 10.1152/ajpendo.00457.2019. Epub 2019 Dec 17.
5
Airyscan super-resolution microscopy of mitochondrial morphology and dynamics in living tumor cells.活肿瘤细胞中线粒体形态与动力学的Airyscan超分辨率显微镜观察
Microsc Res Tech. 2018 Feb;81(2):115-128. doi: 10.1002/jemt.22968. Epub 2017 Nov 13.
6
3D Reconstruction of the Mitochondrial Network within the Neuronal Soma from SBF-SEM Volume Data.从 SBF-SEM 体数据中重建神经元胞体中的线粒体网络的 3D 重构。
Methods Mol Biol. 2024;2831:145-177. doi: 10.1007/978-1-0716-3969-6_11.
7
Methods to Assess Mitochondrial Morphology in Mammalian Cells Mounting Autophagic or Mitophagic Responses.评估哺乳动物细胞中线粒体形态的方法,这些细胞呈现出自噬或线粒体自噬反应。
Methods Enzymol. 2017;588:171-186. doi: 10.1016/bs.mie.2016.09.080. Epub 2016 Nov 12.
8
4Pi microscopy reveals an impaired three-dimensional mitochondrial network of pancreatic islet beta-cells, an experimental model of type-2 diabetes.4Pi显微镜揭示了2型糖尿病实验模型——胰岛β细胞三维线粒体网络受损。
Biochim Biophys Acta. 2010 Jun-Jul;1797(6-7):1327-41. doi: 10.1016/j.bbabio.2010.02.003. Epub 2010 Feb 6.
9
High-throughput detection and quantification of mitochondrial fusion through imaging flow cytometry.通过成像流式细胞术对线粒体融合进行高通量检测和定量分析。
Cytometry A. 2016 Aug;89(8):708-19. doi: 10.1002/cyto.a.22891. Epub 2016 Jul 7.
10
A robust unsupervised machine-learning method to quantify the morphological heterogeneity of cells and nuclei.一种强大的无监督机器学习方法,用于量化细胞和细胞核的形态异质性。
Nat Protoc. 2021 Feb;16(2):754-774. doi: 10.1038/s41596-020-00432-x. Epub 2021 Jan 11.

引用本文的文献

1
FIRM image analysis: A machine learning workflow for quantifying extracellular matrix components from electron microscopy images.FIRM图像分析:一种用于从电子显微镜图像中量化细胞外基质成分的机器学习工作流程。
PLoS One. 2025 Feb 6;20(2):e0312196. doi: 10.1371/journal.pone.0312196. eCollection 2025.
2
Imaging and Quantifying Mitochondrial Morphology in C. elegans During Aging.衰老过程中秀丽隐杆线虫线粒体形态的成像与定量分析
J Vis Exp. 2025 Jan 17(215). doi: 10.3791/67610.
3
Impact of photobleaching on quantitative, spatio-temporal, super-resolution imaging of mitochondria in live larvae.

本文引用的文献

1
Calibration of wide-field deconvolution microscopy for quantitative fluorescence imaging.用于定量荧光成像的宽场反卷积显微镜校准
J Biomol Tech. 2014 Apr;25(1):31-40. doi: 10.7171/jbt.14-2501-002.
2
Regulation and quantification of cellular mitochondrial morphology and content.细胞线粒体形态和含量的调控与定量分析。
Curr Pharm Des. 2014;20(35):5634-52. doi: 10.2174/1381612820666140305230546.
3
Mac-2 binding protein is a novel E-selectin ligand expressed by breast cancer cells.巨噬细胞细胞黏附分子-2 结合蛋白是一种新型的乳腺癌细胞表达的 E-选择素配体。
光漂白对活体幼虫中线粒体的定量、时空、超分辨率成像的影响。
Npj Imaging. 2024;2(1):43. doi: 10.1038/s44303-024-00043-1. Epub 2024 Nov 6.
4
The long non-coding RNA ROSALIND protects the mitochondrial translational machinery from oxidative damage.长链非编码RNA ROSALIND保护线粒体翻译机制免受氧化损伤。
Cell Death Differ. 2025 Mar;32(3):397-415. doi: 10.1038/s41418-024-01377-4. Epub 2024 Sep 18.
5
Membrane-mediated modulation of mitochondrial physiology by terahertz waves.太赫兹波对线粒体生理的膜介导调节
Biomed Opt Express. 2024 Jun 3;15(7):4065-4080. doi: 10.1364/BOE.528706. eCollection 2024 Jul 1.
6
Spinning Disk Confocal Microscopy for Optimized and Quantified Live Imaging of 3D Mitochondrial Network.用于优化和量化 3D 线粒体网络的活细胞成像的旋转盘共焦显微镜。
Int J Mol Sci. 2024 Apr 28;25(9):4819. doi: 10.3390/ijms25094819.
7
Quantitative imaging and semiotic phenotyping of mitochondrial network morphology in live human cells.定量成像和活人体细胞中线粒体网络形态的符号表型分析。
PLoS One. 2024 Mar 28;19(3):e0301372. doi: 10.1371/journal.pone.0301372. eCollection 2024.
8
Mitochondrial heterogeneity in diseases.疾病中的线粒体异质性。
Signal Transduct Target Ther. 2023 Aug 23;8(1):311. doi: 10.1038/s41392-023-01546-w.
9
Neuron stem cell NLRP6 sustains hippocampal neurogenesis to resist stress-induced depression.神经元干细胞NLRP6维持海马神经发生以抵抗应激诱导的抑郁。
Acta Pharm Sin B. 2023 May;13(5):2017-2038. doi: 10.1016/j.apsb.2023.03.010. Epub 2023 Mar 15.
10
Mitochondrial Dynamics during Development.发育过程中的线粒体动力学
Newborn (Clarksville). 2023 Jan-Mar;2(1):19-44. doi: 10.5005/jp-journals-11002-0053. Epub 2023 Apr 6.
PLoS One. 2012;7(9):e44529. doi: 10.1371/journal.pone.0044529. Epub 2012 Sep 6.
4
Mitochondrial dysfunction in pancreatic β cells.胰腺β细胞中的线粒体功能障碍。
Trends Endocrinol Metab. 2012 Sep;23(9):477-87. doi: 10.1016/j.tem.2012.06.002. Epub 2012 Jul 4.
5
BOLA1 is an aerobic protein that prevents mitochondrial morphology changes induced by glutathione depletion.BOLA1 是一种有氧蛋白,可防止谷胱甘肽耗竭引起的线粒体形态变化。
Antioxid Redox Signal. 2013 Jan 10;18(2):129-38. doi: 10.1089/ars.2011.4253. Epub 2012 Sep 11.
6
Trolox-sensitive reactive oxygen species regulate mitochondrial morphology, oxidative phosphorylation and cytosolic calcium handling in healthy cells.Trolox 敏感的活性氧调节健康细胞中线粒体形态、氧化磷酸化和胞质钙处理。
Antioxid Redox Signal. 2012 Dec 15;17(12):1657-69. doi: 10.1089/ars.2011.4294. Epub 2012 Jun 13.
7
Role of alpha-synuclein protein levels in mitochondrial morphology and cell survival in cell lines.α-突触核蛋白水平在细胞系中线粒体形态和细胞存活中的作用。
PLoS One. 2012;7(4):e36377. doi: 10.1371/journal.pone.0036377. Epub 2012 Apr 27.
8
Mitochondrial dynamics and motility inside living vascular endothelial cells: role of bioenergetics.线粒体在活体血管内皮细胞内的动力学和运动:生物能量学的作用。
Ann Biomed Eng. 2012 Sep;40(9):1903-16. doi: 10.1007/s10439-012-0568-6. Epub 2012 Apr 17.
9
Monogenic mitochondrial disorders.单基因线粒体疾病
N Engl J Med. 2012 Mar 22;366(12):1132-41. doi: 10.1056/NEJMra1012478.
10
Standardized mitochondrial analysis gives new insights into mitochondrial dynamics and OPA1 function.标准化的线粒体分析为线粒体动力学和 OPA1 功能提供了新的见解。
Int J Biochem Cell Biol. 2012 Jun;44(6):980-8. doi: 10.1016/j.biocel.2012.03.006. Epub 2012 Mar 17.