布氏锥虫中的基因表达调控网络。

Networks of gene expression regulation in Trypanosoma brucei.

作者信息

Clayton C E

机构信息

Zentrum für Molekulare Biologie der Universität Heidelberg, DKFZ-ZMBH Alliance, Im Neuenheimer Feld 282, 69120 Heidelberg, Germany.

出版信息

Mol Biochem Parasitol. 2014 Jul;195(2):96-106. doi: 10.1016/j.molbiopara.2014.06.005. Epub 2014 Jul 1.

Abstract

Regulation of gene expression in Kinetoplastids relies mainly on post-transcriptional mechanisms. Recent high-throughput analyses, combined with mathematical modelling, have demonstrated possibilities for transcript-specific regulation at every stage: trans splicing, polyadenylation, translation, and degradation of both the precursor and the mature mRNA. Different mRNA degradation pathways result in different types of degradation kinetics. The original idea that the fate of an mRNA - or even just its degradation kinetics - can be defined by a single "regulatory element" is an over-simplification. It is now clear that every mRNA can bind many different proteins, some of which may compete with each other. Superimposed upon this complexity are the interactions of those proteins with effectors of gene expression. The amount of protein that is made from a gene is therefore determined by a complex network of interactions.

摘要

动质体中基因表达的调控主要依赖于转录后机制。最近的高通量分析结合数学建模,已经证明了在转录、多腺苷酸化、翻译以及前体mRNA和成熟mRNA降解的每个阶段进行转录本特异性调控的可能性。不同的mRNA降解途径导致不同类型的降解动力学。认为mRNA的命运——甚至仅仅是其降解动力学——可以由单个“调控元件”定义的最初观点是一种过度简化。现在很清楚,每个mRNA都可以结合许多不同的蛋白质,其中一些可能相互竞争。这些蛋白质与基因表达效应物之间的相互作用进一步增加了这种复杂性。因此,基因产生的蛋白质量是由一个复杂的相互作用网络决定的。

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